diff --git a/docs/generateConfigDocs.ts b/docs/generateConfigDocs.ts index 58e441c032..527212b86c 100644 --- a/docs/generateConfigDocs.ts +++ b/docs/generateConfigDocs.ts @@ -7,18 +7,48 @@ import { getAllFiles, } from './util' import fs from 'fs' -// eslint-disable-next-line @typescript-eslint/no-explicit-any -const contents = {} as { [key: string]: any } -async function generateConfigDocs(files: string[]) { +interface Derives { + name: string + docs: string + code: string +} +interface Id { + name: string + docs: string + code: string +} +interface Conf { + name: string + docs: string + id: string +} +interface Slot { + name: string + docs: string + code: string +} +interface Config { + derives?: Derives + id?: Id + slots: Slot[] + config?: Conf + filename: string +} + +function generateConfigDocs(files: string[]) { + const cwd = process.cwd() + '/' + const contents = {} as { [key: string]: Config } extractWithComment(files, obj => { const fn = obj.filename + const fn2 = fn.replace(cwd, '') if (!contents[fn]) { contents[fn] = { derives: undefined, id: undefined, slots: [], config: undefined, + filename: fn2, } } const current = contents[fn] @@ -36,21 +66,23 @@ async function generateConfigDocs(files: string[]) { current.config = { ...obj, name, docs, id } } }) + return contents } // eslint-disable-next-line @typescript-eslint/no-floating-promises ;(async () => { - await generateConfigDocs(await getAllFiles()) + const contents = generateConfigDocs(await getAllFiles()) - Object.values(contents).forEach(({ config, slots, id, derives }) => { - if (config) { - const idstr = id - ? `### ${config.name} - Identifier + Object.values(contents).forEach( + ({ config, slots, id, derives, filename }) => { + if (config) { + const idstr = id + ? `### ${config.name} - Identifier #### slot: ${id.name}` - : '' - const derivesstr = derives - ? `## ${config.name} - Derives from + : '' + const derivesstr = derives + ? `## ${config.name} - Derives from ${derives.docs} @@ -59,13 +91,13 @@ ${derives.docs} ${derives.code} \`\`\` ` - : '' - const slotstr = - `${slots.length ? `### ${config.name} - Slots` : ''}\n` + - slots - // eslint-disable-next-line @typescript-eslint/no-explicit-any - .map(({ name, docs, code }: any) => { - return `#### slot: ${name} + : '' + const slotstr = + `${slots.length ? `### ${config.name} - Slots` : ''}\n` + + slots + // eslint-disable-next-line @typescript-eslint/no-explicit-any + .map(({ name, docs, code }: any) => { + return `#### slot: ${name} ${docs} @@ -73,12 +105,12 @@ ${docs} ${code} \`\`\` ` - }) - .join('\n') + }) + .join('\n') - fs.writeFileSync( - `website/docs/config/${config.name}.md`, - `--- + fs.writeFileSync( + `website/docs/config/${config.name}.md`, + `--- id: ${config.id} title: ${config.name} toplevel: true @@ -86,6 +118,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[${filename}](https://github.com/GMOD/jbrowse-components/blob/main/${filename}) + ## Docs ${config.docs} @@ -99,7 +135,8 @@ ${slotstr} ${derivesstr} `, - ) - } - }) + ) + } + }, + ) })() diff --git a/docs/generateStateModelDocs.ts b/docs/generateStateModelDocs.ts index 52876908a6..d79221e0ea 100644 --- a/docs/generateStateModelDocs.ts +++ b/docs/generateStateModelDocs.ts @@ -8,12 +8,47 @@ import { } from './util' import fs from 'fs' -// eslint-disable-next-line @typescript-eslint/no-explicit-any -const contents = {} as { [key: string]: any } +interface Action { + name: string + docs: string + code: string +} +interface Method { + name: string + docs: string + code: string +} +interface Getter { + name: string + docs: string + code: string +} +interface Property { + name: string + docs: string + code: string +} + +interface Model { + name: string + id: string + docs: string +} +interface StateModel { + model?: Model + getters: Getter[] + methods: Method[] + properties: Property[] + actions: Action[] + filename: string +} function generateStateModelDocs(files: string[]) { + const cwd = process.cwd() + '/' + const contents = {} as { [key: string]: StateModel } extractWithComment(files, obj => { const fn = obj.filename + const fn2 = fn.replace(cwd, '') if (!contents[fn]) { contents[obj.filename] = { model: undefined, @@ -21,6 +56,7 @@ function generateStateModelDocs(files: string[]) { actions: [], methods: [], properties: [], + filename: fn2, } } const current = contents[fn] @@ -41,14 +77,15 @@ function generateStateModelDocs(files: string[]) { current.properties.push({ ...obj, name, docs, code }) } }) + return contents } // eslint-disable-next-line @typescript-eslint/no-floating-promises ;(async () => { - generateStateModelDocs(await getAllFiles()) + const contents = generateStateModelDocs(await getAllFiles()) Object.values(contents).forEach( - ({ model, getters, properties, actions, methods }) => { + ({ model, getters, properties, actions, methods, filename }) => { if (model) { const getterstr = `${getters.length ? `### ${model.name} - Getters` : ''}\n` + @@ -133,6 +170,13 @@ Note: this document is automatically generated from mobx-state-tree objects in our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info + + +## Source file + +[${filename}](https://github.com/GMOD/jbrowse-components/blob/main/${filename}) + + ## Docs diff --git a/docs/util.ts b/docs/util.ts index 1f31af74ac..46f214ee81 100644 --- a/docs/util.ts +++ b/docs/util.ts @@ -50,6 +50,7 @@ export function extractWithComment( const comment = ts.displayPartsToString( symbol.getDocumentationComment(checker), ) + const fulltext = node.getFullText() const r = { name: symbol.getName(), diff --git a/website/docs/config/AlignmentsTrack.md b/website/docs/config/AlignmentsTrack.md index 9d7d6039fe..f30f58ca6e 100644 --- a/website/docs/config/AlignmentsTrack.md +++ b/website/docs/config/AlignmentsTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/AlignmentsTrack/index.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/AlignmentsTrack/index.ts) + ## Docs has very little config; most config and state logic is on the display diff --git a/website/docs/config/ArcRenderer.md b/website/docs/config/ArcRenderer.md index 9974a4b920..e610c328f1 100644 --- a/website/docs/config/ArcRenderer.md +++ b/website/docs/config/ArcRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/arc/src/ArcRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/arc/src/ArcRenderer/configSchema.ts) + ## Docs ### ArcRenderer - Slots diff --git a/website/docs/config/BamAdapter.md b/website/docs/config/BamAdapter.md index 986a3fddc7..11e21e419f 100644 --- a/website/docs/config/BamAdapter.md +++ b/website/docs/config/BamAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/BamAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/BamAdapter/configSchema.ts) + ## Docs used to configure BAM adapter diff --git a/website/docs/config/BaseAssembly.md b/website/docs/config/BaseAssembly.md index c1d28f29db..13d65c1a7c 100644 --- a/website/docs/config/BaseAssembly.md +++ b/website/docs/config/BaseAssembly.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/assemblyManager/assemblyConfigSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/assemblyManager/assemblyConfigSchema.ts) + ## Docs This corresponds to the assemblies section of the config diff --git a/website/docs/config/BaseChordDisplay.md b/website/docs/config/BaseChordDisplay.md index 84a1a074d6..da5355cc92 100644 --- a/website/docs/config/BaseChordDisplay.md +++ b/website/docs/config/BaseChordDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/circular-view/src/BaseChordDisplay/models/baseChordDisplayConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/circular-view/src/BaseChordDisplay/models/baseChordDisplayConfig.ts) + ## Docs ### BaseChordDisplay - Identifier diff --git a/website/docs/config/BaseConnection.md b/website/docs/config/BaseConnection.md index e01b843c25..fa26e6d88d 100644 --- a/website/docs/config/BaseConnection.md +++ b/website/docs/config/BaseConnection.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/pluggableElementTypes/models/baseConnectionConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/baseConnectionConfig.ts) + ## Docs ### BaseConnection - Identifier diff --git a/website/docs/config/BaseLinearDisplay.md b/website/docs/config/BaseLinearDisplay.md index 1cd406f04a..b66f18509b 100644 --- a/website/docs/config/BaseLinearDisplay.md +++ b/website/docs/config/BaseLinearDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-genome-view/src/BaseLinearDisplay/models/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/BaseLinearDisplay/models/configSchema.ts) + ## Docs `BaseLinearDisplay` is a "base" config that is extended by classes like diff --git a/website/docs/config/BaseRpcDriver.md b/website/docs/config/BaseRpcDriver.md index c050ef8f25..13c829e210 100644 --- a/website/docs/config/BaseRpcDriver.md +++ b/website/docs/config/BaseRpcDriver.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/rpc/baseRpcConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/rpc/baseRpcConfig.ts) + ## Docs ### BaseRpcDriver - Slots diff --git a/website/docs/config/BaseTrack.md b/website/docs/config/BaseTrack.md index f20b7e2024..fc52278c81 100644 --- a/website/docs/config/BaseTrack.md +++ b/website/docs/config/BaseTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/pluggableElementTypes/models/baseTrackConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/baseTrackConfig.ts) + ## Docs ### BaseTrack - Identifier diff --git a/website/docs/config/BasicTrack.md b/website/docs/config/BasicTrack.md index e41334fb51..ee9a0f0512 100644 --- a/website/docs/config/BasicTrack.md +++ b/website/docs/config/BasicTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-genome-view/src/BasicTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/BasicTrack/configSchema.ts) + ## Docs synonym for FeatureTrack diff --git a/website/docs/config/BedAdapter.md b/website/docs/config/BedAdapter.md index c9bd6185c8..3f75378582 100644 --- a/website/docs/config/BedAdapter.md +++ b/website/docs/config/BedAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/bed/src/BedAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/bed/src/BedAdapter/configSchema.ts) + ## Docs ### BedAdapter - Slots diff --git a/website/docs/config/BedTabixAdapter.md b/website/docs/config/BedTabixAdapter.md index 9dfc9ea947..1f3520dea1 100644 --- a/website/docs/config/BedTabixAdapter.md +++ b/website/docs/config/BedTabixAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/bed/src/BedTabixAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/bed/src/BedTabixAdapter/configSchema.ts) + ## Docs ### BedTabixAdapter - Slots diff --git a/website/docs/config/BedpeAdapter.md b/website/docs/config/BedpeAdapter.md index 0a65a23892..dca88e17c1 100644 --- a/website/docs/config/BedpeAdapter.md +++ b/website/docs/config/BedpeAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/bed/src/BedpeAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/bed/src/BedpeAdapter/configSchema.ts) + ## Docs intended for SVs in a single assembly diff --git a/website/docs/config/BgzipFastaAdapter.md b/website/docs/config/BgzipFastaAdapter.md index 4401225786..b4da7c00a0 100644 --- a/website/docs/config/BgzipFastaAdapter.md +++ b/website/docs/config/BgzipFastaAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/BgzipFastaAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/BgzipFastaAdapter/configSchema.ts) + ## Docs ### BgzipFastaAdapter - Slots diff --git a/website/docs/config/BigBedAdapter.md b/website/docs/config/BigBedAdapter.md index 6f4771fed2..016e5e1d4e 100644 --- a/website/docs/config/BigBedAdapter.md +++ b/website/docs/config/BigBedAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/bed/src/BigBedAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/bed/src/BigBedAdapter/configSchema.ts) + ## Docs ### BigBedAdapter - Slots diff --git a/website/docs/config/BigWigAdapter.md b/website/docs/config/BigWigAdapter.md index 1dd5355036..4b650e48d3 100644 --- a/website/docs/config/BigWigAdapter.md +++ b/website/docs/config/BigWigAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/BigWigAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/BigWigAdapter/configSchema.ts) + ## Docs ### BigWigAdapter - Slots diff --git a/website/docs/config/ChainAdapter.md b/website/docs/config/ChainAdapter.md index 0df508eed2..f457ccf95f 100644 --- a/website/docs/config/ChainAdapter.md +++ b/website/docs/config/ChainAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/comparative-adapters/src/ChainAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/comparative-adapters/src/ChainAdapter/configSchema.ts) + ## Docs ### ChainAdapter - Slots diff --git a/website/docs/config/ChordVariantDisplay.md b/website/docs/config/ChordVariantDisplay.md index 0ecc1a6313..c358817658 100644 --- a/website/docs/config/ChordVariantDisplay.md +++ b/website/docs/config/ChordVariantDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/variants/src/ChordVariantDisplay/models/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/ChordVariantDisplay/models/configSchema.ts) + ## Docs ### ChordVariantDisplay - Slots diff --git a/website/docs/config/ChromSizesAdapter.md b/website/docs/config/ChromSizesAdapter.md index a752018d1a..9e9a0914c9 100644 --- a/website/docs/config/ChromSizesAdapter.md +++ b/website/docs/config/ChromSizesAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/ChromSizesAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/ChromSizesAdapter/configSchema.ts) + ## Docs ### ChromSizesAdapter - Slots diff --git a/website/docs/config/CramAdapter.md b/website/docs/config/CramAdapter.md index 33c7d0df92..001280e65c 100644 --- a/website/docs/config/CramAdapter.md +++ b/website/docs/config/CramAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/CramAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/CramAdapter/configSchema.ts) + ## Docs used to configure CRAM adapter diff --git a/website/docs/config/CytobandAdapter.md b/website/docs/config/CytobandAdapter.md index e45a858b5f..2c94ceaa2e 100644 --- a/website/docs/config/CytobandAdapter.md +++ b/website/docs/config/CytobandAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/data_adapters/CytobandAdapter.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/data_adapters/CytobandAdapter.ts) + ## Docs ### CytobandAdapter - Slots diff --git a/website/docs/config/DeltaAdapter.md b/website/docs/config/DeltaAdapter.md index 65a94e9f9e..c23e667b73 100644 --- a/website/docs/config/DeltaAdapter.md +++ b/website/docs/config/DeltaAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/comparative-adapters/src/DeltaAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/comparative-adapters/src/DeltaAdapter/configSchema.ts) + ## Docs ### DeltaAdapter - Slots diff --git a/website/docs/config/DensityRenderer.md b/website/docs/config/DensityRenderer.md index 0ecf6b6fe6..46c38cb88f 100644 --- a/website/docs/config/DensityRenderer.md +++ b/website/docs/config/DensityRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/DensityRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/DensityRenderer/configSchema.ts) + ## Docs ## DensityRenderer - Derives from diff --git a/website/docs/config/DivSequenceRenderer.md b/website/docs/config/DivSequenceRenderer.md index 3519129275..5cc7330b61 100644 --- a/website/docs/config/DivSequenceRenderer.md +++ b/website/docs/config/DivSequenceRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/DivSequenceRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/DivSequenceRenderer/configSchema.ts) + ## Docs ### DivSequenceRenderer - Slots diff --git a/website/docs/config/DotplotDisplay.md b/website/docs/config/DotplotDisplay.md index bd2f927024..c29125d6bd 100644 --- a/website/docs/config/DotplotDisplay.md +++ b/website/docs/config/DotplotDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/dotplot-view/src/DotplotDisplay/index.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/dotplot-view/src/DotplotDisplay/index.ts) + ## Docs ### DotplotDisplay - Identifier diff --git a/website/docs/config/DotplotRenderer.md b/website/docs/config/DotplotRenderer.md index ad393c3db6..0a79a77d99 100644 --- a/website/docs/config/DotplotRenderer.md +++ b/website/docs/config/DotplotRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/dotplot-view/src/DotplotRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/dotplot-view/src/DotplotRenderer/configSchema.ts) + ## Docs ### DotplotRenderer - Slots diff --git a/website/docs/config/DropboxOAuthInternetAccount.md b/website/docs/config/DropboxOAuthInternetAccount.md index 255bcd92ef..faed26b307 100644 --- a/website/docs/config/DropboxOAuthInternetAccount.md +++ b/website/docs/config/DropboxOAuthInternetAccount.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/authentication/src/DropboxOAuthModel/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/authentication/src/DropboxOAuthModel/configSchema.ts) + ## Docs ### DropboxOAuthInternetAccount - Slots diff --git a/website/docs/config/ExternalTokenInternetAccount.md b/website/docs/config/ExternalTokenInternetAccount.md index 43aed9d6d9..79a4250809 100644 --- a/website/docs/config/ExternalTokenInternetAccount.md +++ b/website/docs/config/ExternalTokenInternetAccount.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/authentication/src/ExternalTokenModel/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/authentication/src/ExternalTokenModel/configSchema.ts) + ## Docs ### ExternalTokenInternetAccount - Slots diff --git a/website/docs/config/FeatureTrack.md b/website/docs/config/FeatureTrack.md index 8666257d6e..165130ab05 100644 --- a/website/docs/config/FeatureTrack.md +++ b/website/docs/config/FeatureTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-genome-view/src/FeatureTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/FeatureTrack/configSchema.ts) + ## Docs used for basic gene and feature tracks, generally used with LinearBasicDisplay diff --git a/website/docs/config/FromConfigAdapter.md b/website/docs/config/FromConfigAdapter.md index 178c5e2811..1a3c22d541 100644 --- a/website/docs/config/FromConfigAdapter.md +++ b/website/docs/config/FromConfigAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/config/src/FromConfigAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/config/src/FromConfigAdapter/configSchema.ts) + ## Docs ### FromConfigAdapter - Slots diff --git a/website/docs/config/FromConfigRegionsAdapter.md b/website/docs/config/FromConfigRegionsAdapter.md index b8df4d6a9e..9d38e4e6b7 100644 --- a/website/docs/config/FromConfigRegionsAdapter.md +++ b/website/docs/config/FromConfigRegionsAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/config/src/FromConfigRegionsAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/config/src/FromConfigRegionsAdapter/configSchema.ts) + ## Docs used for specifying refNames+sizes of an assembly diff --git a/website/docs/config/FromConfigSequenceAdapter.md b/website/docs/config/FromConfigSequenceAdapter.md index 7de454badc..bc073edc56 100644 --- a/website/docs/config/FromConfigSequenceAdapter.md +++ b/website/docs/config/FromConfigSequenceAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/config/src/FromConfigSequenceAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/config/src/FromConfigSequenceAdapter/configSchema.ts) + ## Docs ### FromConfigSequenceAdapter - Slots diff --git a/website/docs/config/GCContentAdapter.md b/website/docs/config/GCContentAdapter.md index 495c808935..1d4cc84e04 100644 --- a/website/docs/config/GCContentAdapter.md +++ b/website/docs/config/GCContentAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/gccontent/src/GCContentAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/gccontent/src/GCContentAdapter/configSchema.ts) + ## Docs ### GCContentAdapter - Slots diff --git a/website/docs/config/Gff3Adapter.md b/website/docs/config/Gff3Adapter.md index 3b5c9087d9..5bf472f63c 100644 --- a/website/docs/config/Gff3Adapter.md +++ b/website/docs/config/Gff3Adapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/gff3/src/Gff3Adapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/gff3/src/Gff3Adapter/configSchema.ts) + ## Docs ### Gff3Adapter - Slots diff --git a/website/docs/config/Gff3TabixAdapter.md b/website/docs/config/Gff3TabixAdapter.md index c5417e7851..40bc185a2d 100644 --- a/website/docs/config/Gff3TabixAdapter.md +++ b/website/docs/config/Gff3TabixAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/gff3/src/Gff3TabixAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/gff3/src/Gff3TabixAdapter/configSchema.ts) + ## Docs ### Gff3TabixAdapter - Slots diff --git a/website/docs/config/GoogleDriveOAuthInternetAccount.md b/website/docs/config/GoogleDriveOAuthInternetAccount.md index 03dcc6ddd2..727ac414f7 100644 --- a/website/docs/config/GoogleDriveOAuthInternetAccount.md +++ b/website/docs/config/GoogleDriveOAuthInternetAccount.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/authentication/src/GoogleDriveOAuthModel/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/authentication/src/GoogleDriveOAuthModel/configSchema.ts) + ## Docs ### GoogleDriveOAuthInternetAccount - Slots diff --git a/website/docs/config/GtfAdapter.md b/website/docs/config/GtfAdapter.md index 7acedccddf..95a4bed26e 100644 --- a/website/docs/config/GtfAdapter.md +++ b/website/docs/config/GtfAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/gtf/src/GtfAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/gtf/src/GtfAdapter/configSchema.ts) + ## Docs ### GtfAdapter - Slots diff --git a/website/docs/config/HTTPBasicInternetAccount.md b/website/docs/config/HTTPBasicInternetAccount.md index edf9eac94c..461d26b74c 100644 --- a/website/docs/config/HTTPBasicInternetAccount.md +++ b/website/docs/config/HTTPBasicInternetAccount.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/authentication/src/HTTPBasicModel/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/authentication/src/HTTPBasicModel/configSchema.ts) + ## Docs ### HTTPBasicInternetAccount - Slots diff --git a/website/docs/config/HicAdapter.md b/website/docs/config/HicAdapter.md index f13a2ef62b..60cad02e9b 100644 --- a/website/docs/config/HicAdapter.md +++ b/website/docs/config/HicAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/hic/src/HicAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/hic/src/HicAdapter/configSchema.ts) + ## Docs ### HicAdapter - Slots diff --git a/website/docs/config/HicRenderer.md b/website/docs/config/HicRenderer.md index 035e8f76cf..2f5ff094a8 100644 --- a/website/docs/config/HicRenderer.md +++ b/website/docs/config/HicRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/hic/src/HicRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/hic/src/HicRenderer/configSchema.ts) + ## Docs ### HicRenderer - Slots diff --git a/website/docs/config/HicTrack.md b/website/docs/config/HicTrack.md index eefe8f081c..438de77f04 100644 --- a/website/docs/config/HicTrack.md +++ b/website/docs/config/HicTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/hic/src/HicTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/hic/src/HicTrack/configSchema.ts) + ## Docs ## HicTrack - Derives from diff --git a/website/docs/config/HtsgetBamAdapter.md b/website/docs/config/HtsgetBamAdapter.md index 567ba94459..19af721c64 100644 --- a/website/docs/config/HtsgetBamAdapter.md +++ b/website/docs/config/HtsgetBamAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/HtsgetBamAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/HtsgetBamAdapter/configSchema.ts) + ## Docs Used to fetch data from Htsget endpoints in BAM format, using the gmod/bam diff --git a/website/docs/config/IndexedFastaAdapter.md b/website/docs/config/IndexedFastaAdapter.md index bee9322db5..eb52ce15ad 100644 --- a/website/docs/config/IndexedFastaAdapter.md +++ b/website/docs/config/IndexedFastaAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/IndexedFastaAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/IndexedFastaAdapter/configSchema.ts) + ## Docs ### IndexedFastaAdapter - Slots diff --git a/website/docs/config/InternetAccount.md b/website/docs/config/InternetAccount.md index 8ddf677c42..063dd75ef0 100644 --- a/website/docs/config/InternetAccount.md +++ b/website/docs/config/InternetAccount.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/pluggableElementTypes/models/baseInternetAccountConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/baseInternetAccountConfig.ts) + ## Docs the "base" internet account type diff --git a/website/docs/config/JBrowse1Connection.md b/website/docs/config/JBrowse1Connection.md index 37cdf79fb1..1be355ff87 100644 --- a/website/docs/config/JBrowse1Connection.md +++ b/website/docs/config/JBrowse1Connection.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/legacy-jbrowse/src/JBrowse1Connection/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/legacy-jbrowse/src/JBrowse1Connection/configSchema.ts) + ## Docs ### JBrowse1Connection - Slots diff --git a/website/docs/config/JBrowse1TextSearchAdapter.md b/website/docs/config/JBrowse1TextSearchAdapter.md index d61a3b6735..3267dc1c2b 100644 --- a/website/docs/config/JBrowse1TextSearchAdapter.md +++ b/website/docs/config/JBrowse1TextSearchAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/legacy-jbrowse/src/JBrowse1TextSearchAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/legacy-jbrowse/src/JBrowse1TextSearchAdapter/configSchema.ts) + ## Docs note: metadata about tracks and assemblies covered by text search adapter diff --git a/website/docs/config/JBrowseWebConfiguration.md b/website/docs/config/JBrowseWebConfiguration.md index acf7dc2360..6e0e06f19f 100644 --- a/website/docs/config/JBrowseWebConfiguration.md +++ b/website/docs/config/JBrowseWebConfiguration.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[products/jbrowse-web/src/jbrowseModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/products/jbrowse-web/src/jbrowseModel.ts) + ## Docs configuration here appears as a "configuration" object on the root of diff --git a/website/docs/config/LGVSyntenyDisplay.md b/website/docs/config/LGVSyntenyDisplay.md index 8c55ed7b7a..5b7066ff0f 100644 --- a/website/docs/config/LGVSyntenyDisplay.md +++ b/website/docs/config/LGVSyntenyDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-comparative-view/src/LGVSyntenyDisplay/configSchemaF.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LGVSyntenyDisplay/configSchemaF.ts) + ## Docs ## LGVSyntenyDisplay - Derives from diff --git a/website/docs/config/LinePlotRenderer.md b/website/docs/config/LinePlotRenderer.md index 139d1dd6df..43a366b401 100644 --- a/website/docs/config/LinePlotRenderer.md +++ b/website/docs/config/LinePlotRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/LinePlotRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/LinePlotRenderer/configSchema.ts) + ## Docs ### LinePlotRenderer - Slots diff --git a/website/docs/config/LinearAlignmentsDisplay.md b/website/docs/config/LinearAlignmentsDisplay.md index 0c460b1889..c98f9f04e1 100644 --- a/website/docs/config/LinearAlignmentsDisplay.md +++ b/website/docs/config/LinearAlignmentsDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/LinearAlignmentsDisplay/models/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearAlignmentsDisplay/models/configSchema.ts) + ## Docs has a "pileup" sub-display, where you can see individual reads and a diff --git a/website/docs/config/LinearArcDisplay.md b/website/docs/config/LinearArcDisplay.md index 8702fbe55e..b211f3a430 100644 --- a/website/docs/config/LinearArcDisplay.md +++ b/website/docs/config/LinearArcDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/arc/src/LinearArcDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/arc/src/LinearArcDisplay/configSchema.ts) + ## Docs ### LinearArcDisplay - Slots diff --git a/website/docs/config/LinearBareDisplay.md b/website/docs/config/LinearBareDisplay.md index 9ec2f45aec..60fcaa742e 100644 --- a/website/docs/config/LinearBareDisplay.md +++ b/website/docs/config/LinearBareDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-genome-view/src/LinearBareDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/LinearBareDisplay/configSchema.ts) + ## Docs ### LinearBareDisplay - Slots diff --git a/website/docs/config/LinearBasicDisplay.md b/website/docs/config/LinearBasicDisplay.md index 27231d9b45..925317609f 100644 --- a/website/docs/config/LinearBasicDisplay.md +++ b/website/docs/config/LinearBasicDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-genome-view/src/LinearBasicDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/LinearBasicDisplay/configSchema.ts) + ## Docs ### LinearBasicDisplay - Slots diff --git a/website/docs/config/LinearComparativeDisplay.md b/website/docs/config/LinearComparativeDisplay.md index af7b2d20d2..897b431e88 100644 --- a/website/docs/config/LinearComparativeDisplay.md +++ b/website/docs/config/LinearComparativeDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-comparative-view/src/LinearComparativeDisplay/configSchemaF.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LinearComparativeDisplay/configSchemaF.ts) + ## Docs ### LinearComparativeDisplay - Identifier diff --git a/website/docs/config/LinearGCContentDisplay.md b/website/docs/config/LinearGCContentDisplay.md index 4c2c510ef6..2493017a05 100644 --- a/website/docs/config/LinearGCContentDisplay.md +++ b/website/docs/config/LinearGCContentDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/gccontent/src/LinearGCContentDisplay/config.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/gccontent/src/LinearGCContentDisplay/config.ts) + ## Docs ## LinearGCContentDisplay - Derives from diff --git a/website/docs/config/LinearHicDisplay.md b/website/docs/config/LinearHicDisplay.md index 35a67d9def..765573c4fb 100644 --- a/website/docs/config/LinearHicDisplay.md +++ b/website/docs/config/LinearHicDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/hic/src/LinearHicDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/hic/src/LinearHicDisplay/configSchema.ts) + ## Docs ### LinearHicDisplay - Slots diff --git a/website/docs/config/LinearPileupDisplay.md b/website/docs/config/LinearPileupDisplay.md index 78da2fbce8..0b7dfacd19 100644 --- a/website/docs/config/LinearPileupDisplay.md +++ b/website/docs/config/LinearPileupDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/LinearPileupDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearPileupDisplay/configSchema.ts) + ## Docs ### LinearPileupDisplay - Slots diff --git a/website/docs/config/LinearReadArcsDisplay.md b/website/docs/config/LinearReadArcsDisplay.md index b9d11827cf..1762163e88 100644 --- a/website/docs/config/LinearReadArcsDisplay.md +++ b/website/docs/config/LinearReadArcsDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/LinearReadArcsDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearReadArcsDisplay/configSchema.ts) + ## Docs ### LinearReadArcsDisplay - Slots diff --git a/website/docs/config/LinearReadCloudDisplay.md b/website/docs/config/LinearReadCloudDisplay.md index 5ab83503a9..b1af4866b4 100644 --- a/website/docs/config/LinearReadCloudDisplay.md +++ b/website/docs/config/LinearReadCloudDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/LinearReadCloudDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearReadCloudDisplay/configSchema.ts) + ## Docs ### LinearReadCloudDisplay - Slots diff --git a/website/docs/config/LinearReferenceSequenceDisplay.md b/website/docs/config/LinearReferenceSequenceDisplay.md index af9c10ed70..f369aa967b 100644 --- a/website/docs/config/LinearReferenceSequenceDisplay.md +++ b/website/docs/config/LinearReferenceSequenceDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/LinearReferenceSequenceDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/LinearReferenceSequenceDisplay/configSchema.ts) + ## Docs ### LinearReferenceSequenceDisplay - Slots diff --git a/website/docs/config/LinearSNPCoverageDisplay.md b/website/docs/config/LinearSNPCoverageDisplay.md index ceee2f64c9..b2ae815c0b 100644 --- a/website/docs/config/LinearSNPCoverageDisplay.md +++ b/website/docs/config/LinearSNPCoverageDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/LinearSNPCoverageDisplay/models/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearSNPCoverageDisplay/models/configSchema.ts) + ## Docs ### LinearSNPCoverageDisplay - Slots diff --git a/website/docs/config/LinearSyntenyDisplay.md b/website/docs/config/LinearSyntenyDisplay.md index 60a18ada0a..2e1d0a39a9 100644 --- a/website/docs/config/LinearSyntenyDisplay.md +++ b/website/docs/config/LinearSyntenyDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-comparative-view/src/LinearSyntenyDisplay/configSchemaF.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LinearSyntenyDisplay/configSchemaF.ts) + ## Docs ### LinearSyntenyDisplay - Slots diff --git a/website/docs/config/LinearVariantDisplay.md b/website/docs/config/LinearVariantDisplay.md index 39a298e981..b428a47474 100644 --- a/website/docs/config/LinearVariantDisplay.md +++ b/website/docs/config/LinearVariantDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/variants/src/LinearVariantDisplay/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/LinearVariantDisplay/configSchema.ts) + ## Docs mostly empty, this display type is very much like a `FeatureTrack` with a diff --git a/website/docs/config/LinearWiggleDisplay.md b/website/docs/config/LinearWiggleDisplay.md index 27e25a2b72..f0c5f4cd6e 100644 --- a/website/docs/config/LinearWiggleDisplay.md +++ b/website/docs/config/LinearWiggleDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/LinearWiggleDisplay/models/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/LinearWiggleDisplay/models/configSchema.ts) + ## Docs ### LinearWiggleDisplay - Slots diff --git a/website/docs/config/MCScanAnchorsAdapter.md b/website/docs/config/MCScanAnchorsAdapter.md index 898b1b49fc..394a96e41c 100644 --- a/website/docs/config/MCScanAnchorsAdapter.md +++ b/website/docs/config/MCScanAnchorsAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/comparative-adapters/src/MCScanAnchorsAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/comparative-adapters/src/MCScanAnchorsAdapter/configSchema.ts) + ## Docs ### MCScanAnchorsAdapter - Slots diff --git a/website/docs/config/MCScanSimpleAnchorsAdapter.md b/website/docs/config/MCScanSimpleAnchorsAdapter.md index f9f350b164..a24f78da82 100644 --- a/website/docs/config/MCScanSimpleAnchorsAdapter.md +++ b/website/docs/config/MCScanSimpleAnchorsAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/comparative-adapters/src/MCScanSimpleAnchorsAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/comparative-adapters/src/MCScanSimpleAnchorsAdapter/configSchema.ts) + ## Docs ### MCScanSimpleAnchorsAdapter - Slots diff --git a/website/docs/config/MainThreadRpcDriver.md b/website/docs/config/MainThreadRpcDriver.md index 8b2d4a8b43..bec5a202be 100644 --- a/website/docs/config/MainThreadRpcDriver.md +++ b/website/docs/config/MainThreadRpcDriver.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/rpc/mainThreadRpcConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/rpc/mainThreadRpcConfig.ts) + ## Docs ## MainThreadRpcDriver - Derives from diff --git a/website/docs/config/MashMapAdapter.md b/website/docs/config/MashMapAdapter.md index d81d95b2df..ef34f6a119 100644 --- a/website/docs/config/MashMapAdapter.md +++ b/website/docs/config/MashMapAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/comparative-adapters/src/MashMapAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/comparative-adapters/src/MashMapAdapter/configSchema.ts) + ## Docs ### MashMapAdapter - Slots diff --git a/website/docs/config/MultiDensityRenderer.md b/website/docs/config/MultiDensityRenderer.md index 1598a14b01..d3f827e48b 100644 --- a/website/docs/config/MultiDensityRenderer.md +++ b/website/docs/config/MultiDensityRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiDensityRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiDensityRenderer/configSchema.ts) + ## Docs ## MultiDensityRenderer - Derives from diff --git a/website/docs/config/MultiLineRenderer.md b/website/docs/config/MultiLineRenderer.md index 3b646f91a2..a981765e49 100644 --- a/website/docs/config/MultiLineRenderer.md +++ b/website/docs/config/MultiLineRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiLineRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiLineRenderer/configSchema.ts) + ## Docs ### MultiLineRenderer - Slots diff --git a/website/docs/config/MultiLinearWiggleDisplay.md b/website/docs/config/MultiLinearWiggleDisplay.md index bdd7995c14..9561667385 100644 --- a/website/docs/config/MultiLinearWiggleDisplay.md +++ b/website/docs/config/MultiLinearWiggleDisplay.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiLinearWiggleDisplay/models/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiLinearWiggleDisplay/models/configSchema.ts) + ## Docs ### MultiLinearWiggleDisplay - Slots diff --git a/website/docs/config/MultiQuantitativeTrack.md b/website/docs/config/MultiQuantitativeTrack.md index abae1e207f..e532c28785 100644 --- a/website/docs/config/MultiQuantitativeTrack.md +++ b/website/docs/config/MultiQuantitativeTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiQuantitativeTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiQuantitativeTrack/configSchema.ts) + ## Docs ## MultiQuantitativeTrack - Derives from diff --git a/website/docs/config/MultiRowLineRenderer.md b/website/docs/config/MultiRowLineRenderer.md index 2d7ac8c885..f6c6360440 100644 --- a/website/docs/config/MultiRowLineRenderer.md +++ b/website/docs/config/MultiRowLineRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiRowLineRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiRowLineRenderer/configSchema.ts) + ## Docs ### MultiRowLineRenderer - Slots diff --git a/website/docs/config/MultiRowXYPlotRenderer.md b/website/docs/config/MultiRowXYPlotRenderer.md index 95aa92a7f6..84bad420fa 100644 --- a/website/docs/config/MultiRowXYPlotRenderer.md +++ b/website/docs/config/MultiRowXYPlotRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiRowXYPlotRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiRowXYPlotRenderer/configSchema.ts) + ## Docs ### MultiRowXYPlotRenderer - Slots diff --git a/website/docs/config/MultiWiggleAdapter.md b/website/docs/config/MultiWiggleAdapter.md index 581d42bd9a..b3c3e1e7be 100644 --- a/website/docs/config/MultiWiggleAdapter.md +++ b/website/docs/config/MultiWiggleAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiWiggleAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiWiggleAdapter/configSchema.ts) + ## Docs ### MultiWiggleAdapter - Slots diff --git a/website/docs/config/MultiXYPlotRenderer.md b/website/docs/config/MultiXYPlotRenderer.md index 2fc0b6be2f..0b2830a467 100644 --- a/website/docs/config/MultiXYPlotRenderer.md +++ b/website/docs/config/MultiXYPlotRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/MultiXYPlotRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/MultiXYPlotRenderer/configSchema.ts) + ## Docs ### MultiXYPlotRenderer - Slots diff --git a/website/docs/config/NCListAdapter.md b/website/docs/config/NCListAdapter.md index 5fc5148e1b..0af6577550 100644 --- a/website/docs/config/NCListAdapter.md +++ b/website/docs/config/NCListAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/legacy-jbrowse/src/NCListAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/legacy-jbrowse/src/NCListAdapter/configSchema.ts) + ## Docs ### NCListAdapter - Slots diff --git a/website/docs/config/OAuthInternetAccount.md b/website/docs/config/OAuthInternetAccount.md index d22f11216c..ad5791f29c 100644 --- a/website/docs/config/OAuthInternetAccount.md +++ b/website/docs/config/OAuthInternetAccount.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/authentication/src/OAuthModel/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/authentication/src/OAuthModel/configSchema.ts) + ## Docs ### OAuthInternetAccount - Slots diff --git a/website/docs/config/PAFAdapter.md b/website/docs/config/PAFAdapter.md index 5c328ca98d..d58e59e936 100644 --- a/website/docs/config/PAFAdapter.md +++ b/website/docs/config/PAFAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/comparative-adapters/src/PAFAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/comparative-adapters/src/PAFAdapter/configSchema.ts) + ## Docs ### PAFAdapter - Slots diff --git a/website/docs/config/PileupRenderer.md b/website/docs/config/PileupRenderer.md index f526b2385e..27bb667f3a 100644 --- a/website/docs/config/PileupRenderer.md +++ b/website/docs/config/PileupRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/PileupRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/PileupRenderer/configSchema.ts) + ## Docs ### PileupRenderer - Slots diff --git a/website/docs/config/QuantitativeTrack.md b/website/docs/config/QuantitativeTrack.md index 7cf63b4540..1eb4f42c59 100644 --- a/website/docs/config/QuantitativeTrack.md +++ b/website/docs/config/QuantitativeTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/QuantitativeTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/QuantitativeTrack/configSchema.ts) + ## Docs ## QuantitativeTrack - Derives from diff --git a/website/docs/config/RefNameAliasAdapter.md b/website/docs/config/RefNameAliasAdapter.md index f555d74e2a..795340663c 100644 --- a/website/docs/config/RefNameAliasAdapter.md +++ b/website/docs/config/RefNameAliasAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/config/src/RefNameAliasAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/config/src/RefNameAliasAdapter/configSchema.ts) + ## Docs can read "chromAliases" type files from UCSC or any tab separated file of diff --git a/website/docs/config/ReferenceSequenceTrack.md b/website/docs/config/ReferenceSequenceTrack.md index 9186744152..952cb5e53a 100644 --- a/website/docs/config/ReferenceSequenceTrack.md +++ b/website/docs/config/ReferenceSequenceTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/ReferenceSequenceTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/ReferenceSequenceTrack/configSchema.ts) + ## Docs used to display base level DNA sequence tracks diff --git a/website/docs/config/RpcOptions.md b/website/docs/config/RpcOptions.md index e152cb5429..72c211792f 100644 --- a/website/docs/config/RpcOptions.md +++ b/website/docs/config/RpcOptions.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/rpc/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/rpc/configSchema.ts) + ## Docs ### RpcOptions - Slots diff --git a/website/docs/config/SNPCoverageAdapter.md b/website/docs/config/SNPCoverageAdapter.md index 779389149d..f1ac34d106 100644 --- a/website/docs/config/SNPCoverageAdapter.md +++ b/website/docs/config/SNPCoverageAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/SNPCoverageAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/SNPCoverageAdapter/configSchema.ts) + ## Docs ### SNPCoverageAdapter - Slots diff --git a/website/docs/config/SNPCoverageRenderer.md b/website/docs/config/SNPCoverageRenderer.md index 47005fb597..21e00b7c03 100644 --- a/website/docs/config/SNPCoverageRenderer.md +++ b/website/docs/config/SNPCoverageRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/alignments/src/SNPCoverageRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/SNPCoverageRenderer/configSchema.ts) + ## Docs ### SNPCoverageRenderer - Slots diff --git a/website/docs/config/SequenceSearchAdapter.md b/website/docs/config/SequenceSearchAdapter.md index ad21f158b7..5ee7d61df0 100644 --- a/website/docs/config/SequenceSearchAdapter.md +++ b/website/docs/config/SequenceSearchAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/SequenceSearchAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/SequenceSearchAdapter/configSchema.ts) + ## Docs ### SequenceSearchAdapter - Slots diff --git a/website/docs/config/StructuralVariantChordRenderer.md b/website/docs/config/StructuralVariantChordRenderer.md index eb38b2395c..58e8569aa1 100644 --- a/website/docs/config/StructuralVariantChordRenderer.md +++ b/website/docs/config/StructuralVariantChordRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/variants/src/StructuralVariantChordRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/StructuralVariantChordRenderer/configSchema.ts) + ## Docs ### StructuralVariantChordRenderer - Slots diff --git a/website/docs/config/SvgFeatureRenderer.md b/website/docs/config/SvgFeatureRenderer.md index cb6683a783..a2f3e4638f 100644 --- a/website/docs/config/SvgFeatureRenderer.md +++ b/website/docs/config/SvgFeatureRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/svg/src/SvgFeatureRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/svg/src/SvgFeatureRenderer/configSchema.ts) + ## Docs ### SvgFeatureRenderer - Slots diff --git a/website/docs/config/SyntenyTrack.md b/website/docs/config/SyntenyTrack.md index 8a50aafbd0..42c5c9896d 100644 --- a/website/docs/config/SyntenyTrack.md +++ b/website/docs/config/SyntenyTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/linear-comparative-view/src/SyntenyTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/SyntenyTrack/configSchema.ts) + ## Docs ## SyntenyTrack - Derives from diff --git a/website/docs/config/TrixTextSearchAdapter.md b/website/docs/config/TrixTextSearchAdapter.md index 94d9e90344..44903f75d7 100644 --- a/website/docs/config/TrixTextSearchAdapter.md +++ b/website/docs/config/TrixTextSearchAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/trix/src/TrixTextSearchAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/trix/src/TrixTextSearchAdapter/configSchema.ts) + ## Docs ### TrixTextSearchAdapter - Identifier diff --git a/website/docs/config/TwoBitAdapter.md b/website/docs/config/TwoBitAdapter.md index ef7796973b..52407150ff 100644 --- a/website/docs/config/TwoBitAdapter.md +++ b/website/docs/config/TwoBitAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/sequence/src/TwoBitAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/TwoBitAdapter/configSchema.ts) + ## Docs ### TwoBitAdapter - Slots diff --git a/website/docs/config/UCSCTrackHubConnection.md b/website/docs/config/UCSCTrackHubConnection.md index 6f5c0b29db..ffc2e4e029 100644 --- a/website/docs/config/UCSCTrackHubConnection.md +++ b/website/docs/config/UCSCTrackHubConnection.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/data-management/src/ucsc-trackhub/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/data-management/src/ucsc-trackhub/configSchema.ts) + ## Docs ### UCSCTrackHubConnection - Slots diff --git a/website/docs/config/VariantTrack.md b/website/docs/config/VariantTrack.md index 60e49546c6..7af994964d 100644 --- a/website/docs/config/VariantTrack.md +++ b/website/docs/config/VariantTrack.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/variants/src/VariantTrack/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/VariantTrack/configSchema.ts) + ## Docs Mostly similar to feature track, but has `ChordDisplayType` registered to it, diff --git a/website/docs/config/VcfAdapter.md b/website/docs/config/VcfAdapter.md index a0f8ac0efd..7ab2292bd2 100644 --- a/website/docs/config/VcfAdapter.md +++ b/website/docs/config/VcfAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/variants/src/VcfAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/VcfAdapter/configSchema.ts) + ## Docs ### VcfAdapter - Slots diff --git a/website/docs/config/VcfTabixAdapter.md b/website/docs/config/VcfTabixAdapter.md index 0abf977598..bd2305ab54 100644 --- a/website/docs/config/VcfTabixAdapter.md +++ b/website/docs/config/VcfTabixAdapter.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/variants/src/VcfTabixAdapter/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/VcfTabixAdapter/configSchema.ts) + ## Docs ### VcfTabixAdapter - Slots diff --git a/website/docs/config/WebWorkerRpcDriver.md b/website/docs/config/WebWorkerRpcDriver.md index 4fc7dd3309..8e992b2685 100644 --- a/website/docs/config/WebWorkerRpcDriver.md +++ b/website/docs/config/WebWorkerRpcDriver.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[packages/core/rpc/webWorkerRpcConfig.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/rpc/webWorkerRpcConfig.ts) + ## Docs ## WebWorkerRpcDriver - Derives from diff --git a/website/docs/config/WiggleRenderer.md b/website/docs/config/WiggleRenderer.md index 802b6f6505..b6e6a4f8ad 100644 --- a/website/docs/config/WiggleRenderer.md +++ b/website/docs/config/WiggleRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/configSchema.ts) + ## Docs this is the "base wiggle renderer config schema" diff --git a/website/docs/config/XYPlotRenderer.md b/website/docs/config/XYPlotRenderer.md index f62065b486..272dfc892d 100644 --- a/website/docs/config/XYPlotRenderer.md +++ b/website/docs/config/XYPlotRenderer.md @@ -7,6 +7,10 @@ toplevel: true Note: this document is automatically generated from configuration objects in our source code. See [Config guide](/docs/config_guide) for more info +## Source file + +[plugins/wiggle/src/XYPlotRenderer/configSchema.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/XYPlotRenderer/configSchema.ts) + ## Docs ### XYPlotRenderer - Slots diff --git a/website/docs/models/Base1DView.md b/website/docs/models/Base1DView.md index 7dacacb8ad..564e7a95db 100644 --- a/website/docs/models/Base1DView.md +++ b/website/docs/models/Base1DView.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/util/Base1DViewModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/util/Base1DViewModel.ts) + ## Docs used in non-lgv view representations of a 1d view e.g. the two axes of the diff --git a/website/docs/models/BaseChordDisplay.md b/website/docs/models/BaseChordDisplay.md index aa57a185fe..0d644fb5cd 100644 --- a/website/docs/models/BaseChordDisplay.md +++ b/website/docs/models/BaseChordDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/circular-view/src/BaseChordDisplay/models/BaseChordDisplayModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/circular-view/src/BaseChordDisplay/models/BaseChordDisplayModel.ts) + ## Docs extends `BaseDisplay` diff --git a/website/docs/models/BaseConnectionModel.md b/website/docs/models/BaseConnectionModel.md index 1d11d21066..2d0f02581e 100644 --- a/website/docs/models/BaseConnectionModel.md +++ b/website/docs/models/BaseConnectionModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/pluggableElementTypes/models/BaseConnectionModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/BaseConnectionModelFactory.ts) + ## Docs ### BaseConnectionModel - Properties diff --git a/website/docs/models/BaseDisplay.md b/website/docs/models/BaseDisplay.md index f5618b96a1..58e67e281c 100644 --- a/website/docs/models/BaseDisplay.md +++ b/website/docs/models/BaseDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/pluggableElementTypes/models/BaseDisplayModel.tsx](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/BaseDisplayModel.tsx) + ## Docs ### BaseDisplay - Properties diff --git a/website/docs/models/BaseInternetAccountModel.md b/website/docs/models/BaseInternetAccountModel.md index dba845c41e..e9bd4e0388 100644 --- a/website/docs/models/BaseInternetAccountModel.md +++ b/website/docs/models/BaseInternetAccountModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/pluggableElementTypes/models/InternetAccountModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/InternetAccountModel.ts) + ## Docs ### BaseInternetAccountModel - Properties diff --git a/website/docs/models/BaseLinearDisplay.md b/website/docs/models/BaseLinearDisplay.md index 4bdcc9fd12..fc5135e870 100644 --- a/website/docs/models/BaseLinearDisplay.md +++ b/website/docs/models/BaseLinearDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-genome-view/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx) + ## Docs extends `BaseDisplay` diff --git a/website/docs/models/BaseTrackModel.md b/website/docs/models/BaseTrackModel.md index 5e03f7e5e5..88a29847b5 100644 --- a/website/docs/models/BaseTrackModel.md +++ b/website/docs/models/BaseTrackModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/pluggableElementTypes/models/BaseTrackModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/BaseTrackModel.ts) + ## Docs these MST models only exist for tracks that are _shown_. they should contain diff --git a/website/docs/models/BaseViewModel.md b/website/docs/models/BaseViewModel.md index e9c2c059e3..e257f8927c 100644 --- a/website/docs/models/BaseViewModel.md +++ b/website/docs/models/BaseViewModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/pluggableElementTypes/models/BaseViewModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/pluggableElementTypes/models/BaseViewModel.ts) + ## Docs ### BaseViewModel - Properties diff --git a/website/docs/models/CircularView.md b/website/docs/models/CircularView.md index 917cbdc45d..a42f222552 100644 --- a/website/docs/models/CircularView.md +++ b/website/docs/models/CircularView.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/circular-view/src/CircularView/models/CircularView.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/circular-view/src/CircularView/models/CircularView.ts) + ## Docs extends `BaseViewModel` diff --git a/website/docs/models/DotplotDisplay.md b/website/docs/models/DotplotDisplay.md index 03f7f7a83e..e49c9f6450 100644 --- a/website/docs/models/DotplotDisplay.md +++ b/website/docs/models/DotplotDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/dotplot-view/src/DotplotDisplay/stateModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/dotplot-view/src/DotplotDisplay/stateModelFactory.ts) + ## Docs ### DotplotDisplay - Properties diff --git a/website/docs/models/DotplotView.md b/website/docs/models/DotplotView.md index 09653f5b30..2607ca7713 100644 --- a/website/docs/models/DotplotView.md +++ b/website/docs/models/DotplotView.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/dotplot-view/src/DotplotView/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/dotplot-view/src/DotplotView/model.ts) + ## Docs ### DotplotView - Properties diff --git a/website/docs/models/JBrowseDesktopSessionModel.md b/website/docs/models/JBrowseDesktopSessionModel.md index 9a6c63f105..ca93e867df 100644 --- a/website/docs/models/JBrowseDesktopSessionModel.md +++ b/website/docs/models/JBrowseDesktopSessionModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[products/jbrowse-desktop/src/sessionModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/products/jbrowse-desktop/src/sessionModelFactory.ts) + ## Docs inherits SnackbarModel diff --git a/website/docs/models/JBrowseReactCGVSessionModel.md b/website/docs/models/JBrowseReactCGVSessionModel.md index 0211cec96a..185b8ef1ed 100644 --- a/website/docs/models/JBrowseReactCGVSessionModel.md +++ b/website/docs/models/JBrowseReactCGVSessionModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[products/jbrowse-react-circular-genome-view/src/createModel/createSessionModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/products/jbrowse-react-circular-genome-view/src/createModel/createSessionModel.ts) + ## Docs ### JBrowseReactCGVSessionModel - Properties diff --git a/website/docs/models/JBrowseReactLGVSessionModel.md b/website/docs/models/JBrowseReactLGVSessionModel.md index e0a805010f..59ba2b0e03 100644 --- a/website/docs/models/JBrowseReactLGVSessionModel.md +++ b/website/docs/models/JBrowseReactLGVSessionModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[products/jbrowse-react-linear-genome-view/src/createModel/createSessionModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/products/jbrowse-react-linear-genome-view/src/createModel/createSessionModel.ts) + ## Docs inherits SnackbarModel diff --git a/website/docs/models/JBrowseWebRootModel.md b/website/docs/models/JBrowseWebRootModel.md index 5ba4932a1b..cc1966cf30 100644 --- a/website/docs/models/JBrowseWebRootModel.md +++ b/website/docs/models/JBrowseWebRootModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[products/jbrowse-web/src/rootModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/products/jbrowse-web/src/rootModel.ts) + ## Docs note that many properties of the root model are available through the session, diff --git a/website/docs/models/JBrowseWebSessionModel.md b/website/docs/models/JBrowseWebSessionModel.md index 0e247a8de2..0a652342f7 100644 --- a/website/docs/models/JBrowseWebSessionModel.md +++ b/website/docs/models/JBrowseWebSessionModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[products/jbrowse-web/src/sessionModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/products/jbrowse-web/src/sessionModelFactory.ts) + ## Docs inherits SnackbarModel diff --git a/website/docs/models/LGVSyntenyDisplay.md b/website/docs/models/LGVSyntenyDisplay.md index 93d5888dfa..f5cf955724 100644 --- a/website/docs/models/LGVSyntenyDisplay.md +++ b/website/docs/models/LGVSyntenyDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-comparative-view/src/LGVSyntenyDisplay/stateModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LGVSyntenyDisplay/stateModelFactory.ts) + ## Docs extends `LinearPileupDisplay`, displays location of "synteny" feature in a plain diff --git a/website/docs/models/LinearAlignmentsDisplay.md b/website/docs/models/LinearAlignmentsDisplay.md index f21eeaa7be..77959e49a3 100644 --- a/website/docs/models/LinearAlignmentsDisplay.md +++ b/website/docs/models/LinearAlignmentsDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/alignments/src/LinearAlignmentsDisplay/models/model.tsx](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearAlignmentsDisplay/models/model.tsx) + ## Docs extends `BaseDisplay` diff --git a/website/docs/models/LinearBareDisplay.md b/website/docs/models/LinearBareDisplay.md index 4f688fefee..52c15958b2 100644 --- a/website/docs/models/LinearBareDisplay.md +++ b/website/docs/models/LinearBareDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-genome-view/src/LinearBareDisplay/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/LinearBareDisplay/model.ts) + ## Docs extends `BaseLinearDisplay` diff --git a/website/docs/models/LinearBasicDisplay.md b/website/docs/models/LinearBasicDisplay.md index 4f430ed8a0..141aa3a5bc 100644 --- a/website/docs/models/LinearBasicDisplay.md +++ b/website/docs/models/LinearBasicDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-genome-view/src/LinearBasicDisplay/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/LinearBasicDisplay/model.ts) + ## Docs used by `FeatureTrack`, has simple settings like "show/hide feature labels", diff --git a/website/docs/models/LinearComparativeDisplay.md b/website/docs/models/LinearComparativeDisplay.md index 8cc0c6fc99..6adafdc98f 100644 --- a/website/docs/models/LinearComparativeDisplay.md +++ b/website/docs/models/LinearComparativeDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-comparative-view/src/LinearComparativeDisplay/stateModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LinearComparativeDisplay/stateModelFactory.ts) + ## Docs ### LinearComparativeDisplay - Properties diff --git a/website/docs/models/LinearComparativeView.md b/website/docs/models/LinearComparativeView.md index 87d649748e..f3cf7e6b35 100644 --- a/website/docs/models/LinearComparativeView.md +++ b/website/docs/models/LinearComparativeView.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-comparative-view/src/LinearComparativeView/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LinearComparativeView/model.ts) + ## Docs ### LinearComparativeView - Properties diff --git a/website/docs/models/LinearGCContentDisplay.md b/website/docs/models/LinearGCContentDisplay.md index b88f576eb8..9c92bef627 100644 --- a/website/docs/models/LinearGCContentDisplay.md +++ b/website/docs/models/LinearGCContentDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/gccontent/src/LinearGCContentDisplay/stateModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/gccontent/src/LinearGCContentDisplay/stateModel.ts) + ## Docs base model BaseWiggleDisplayModel diff --git a/website/docs/models/LinearGenomeView.md b/website/docs/models/LinearGenomeView.md index 439f1f1086..f0af2c6783 100644 --- a/website/docs/models/LinearGenomeView.md +++ b/website/docs/models/LinearGenomeView.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-genome-view/src/LinearGenomeView/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-genome-view/src/LinearGenomeView/model.ts) + ## Docs ### LinearGenomeView - Properties @@ -147,7 +151,9 @@ show the "center line" IOptionalIType, [undefined]> // code showCenterLine: types.optional(types.boolean, () => - JSON.parse(localStorageGetItem('lgv-showCenterLine') || 'false'), + Boolean( + JSON.parse(localStorageGetItem('lgv-showCenterLine') || 'false'), + ), ) ``` @@ -160,7 +166,9 @@ show the "cytobands" in the overview scale bar IOptionalIType, [undefined]> // code showCytobandsSetting: types.optional(types.boolean, () => - JSON.parse(localStorageGetItem('lgv-showCytobands') || 'true'), + Boolean( + JSON.parse(localStorageGetItem('lgv-showCytobands') || 'true'), + ), ) ``` diff --git a/website/docs/models/LinearPileupDisplay.md b/website/docs/models/LinearPileupDisplay.md index 57bc605f1b..ede39f6712 100644 --- a/website/docs/models/LinearPileupDisplay.md +++ b/website/docs/models/LinearPileupDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/alignments/src/LinearPileupDisplay/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearPileupDisplay/model.ts) + ## Docs extends `BaseLinearDisplay` diff --git a/website/docs/models/LinearReadArcsDisplay.md b/website/docs/models/LinearReadArcsDisplay.md index 76f301b441..6553af5a94 100644 --- a/website/docs/models/LinearReadArcsDisplay.md +++ b/website/docs/models/LinearReadArcsDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/alignments/src/LinearReadArcsDisplay/model.tsx](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearReadArcsDisplay/model.tsx) + ## Docs extends `BaseLinearDisplay` diff --git a/website/docs/models/LinearReadCloudDisplay.md b/website/docs/models/LinearReadCloudDisplay.md index 57b772f4a1..5e5051711a 100644 --- a/website/docs/models/LinearReadCloudDisplay.md +++ b/website/docs/models/LinearReadCloudDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/alignments/src/LinearReadCloudDisplay/model.tsx](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearReadCloudDisplay/model.tsx) + ## Docs extends `BaseLinearDisplay` diff --git a/website/docs/models/LinearReferenceSequenceDisplay.md b/website/docs/models/LinearReferenceSequenceDisplay.md index a8da8f7abd..a46b3fb974 100644 --- a/website/docs/models/LinearReferenceSequenceDisplay.md +++ b/website/docs/models/LinearReferenceSequenceDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/sequence/src/LinearReferenceSequenceDisplay/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/sequence/src/LinearReferenceSequenceDisplay/model.ts) + ## Docs base model `BaseLinearDisplay` diff --git a/website/docs/models/LinearSNPCoverageDisplay.md b/website/docs/models/LinearSNPCoverageDisplay.md index bdee8ce3c7..5c051f19cb 100644 --- a/website/docs/models/LinearSNPCoverageDisplay.md +++ b/website/docs/models/LinearSNPCoverageDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/alignments/src/LinearSNPCoverageDisplay/models/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/alignments/src/LinearSNPCoverageDisplay/models/model.ts) + ## Docs extends `LinearWiggleDisplay` diff --git a/website/docs/models/LinearSyntenyDisplay.md b/website/docs/models/LinearSyntenyDisplay.md index c9694430bf..e5ecc365e7 100644 --- a/website/docs/models/LinearSyntenyDisplay.md +++ b/website/docs/models/LinearSyntenyDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-comparative-view/src/LinearSyntenyDisplay/stateModelFactory.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LinearSyntenyDisplay/stateModelFactory.ts) + ## Docs extends `LinearComparativeDisplay` model diff --git a/website/docs/models/LinearSyntenyView.md b/website/docs/models/LinearSyntenyView.md index 81c7870158..64ad77d0b1 100644 --- a/website/docs/models/LinearSyntenyView.md +++ b/website/docs/models/LinearSyntenyView.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/linear-comparative-view/src/LinearSyntenyView/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/linear-comparative-view/src/LinearSyntenyView/model.ts) + ## Docs extends the `LinearComparativeView` base model diff --git a/website/docs/models/LinearVariantDisplay.md b/website/docs/models/LinearVariantDisplay.md index 0388f46a77..642d1580bc 100644 --- a/website/docs/models/LinearVariantDisplay.md +++ b/website/docs/models/LinearVariantDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/variants/src/LinearVariantDisplay/model.ts](https://github.com/GMOD/jbrowse-components/blob/main/plugins/variants/src/LinearVariantDisplay/model.ts) + ## Docs extends `LinearBasicDisplay` very similar to basic display, but provides custom diff --git a/website/docs/models/LinearWiggleDisplay.md b/website/docs/models/LinearWiggleDisplay.md index 2246db4f2f..121d6a10a0 100644 --- a/website/docs/models/LinearWiggleDisplay.md +++ b/website/docs/models/LinearWiggleDisplay.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[plugins/wiggle/src/LinearWiggleDisplay/models/model.tsx](https://github.com/GMOD/jbrowse-components/blob/main/plugins/wiggle/src/LinearWiggleDisplay/models/model.tsx) + ## Docs Extends `BaseLinearDisplay` diff --git a/website/docs/models/SnackbarModel.md b/website/docs/models/SnackbarModel.md index 46f2aa2bd1..60f5279174 100644 --- a/website/docs/models/SnackbarModel.md +++ b/website/docs/models/SnackbarModel.md @@ -9,6 +9,10 @@ our source code. See [Core concepts and intro to pluggable elements](/docs/developer_guide/) for more info +## Source file + +[packages/core/ui/SnackbarModel.ts](https://github.com/GMOD/jbrowse-components/blob/main/packages/core/ui/SnackbarModel.ts) + ## Docs ### SnackbarModel - Getters diff --git a/website/yarn.lock b/website/yarn.lock index f2ac69047c..5ba242b00f 100644 --- a/website/yarn.lock +++ b/website/yarn.lock @@ -1853,10 +1853,10 @@ resolved "https://registry.yarnpkg.com/@mdx-js/util/-/util-1.6.22.tgz#219dfd89ae5b97a8801f015323ffa4b62f45718b" integrity sha512-H1rQc1ZOHANWBvPcW+JpGwr+juXSxM8Q8YCkm3GhZd8REu1fHR3z99CErO1p9pkcfcxZnMdIZdIsXkOHY0NilA== -"@mui/base@5.0.0-alpha.113": - version "5.0.0-alpha.113" - resolved "https://registry.yarnpkg.com/@mui/base/-/base-5.0.0-alpha.113.tgz#51ab20c3a4cf31db4a5540ecf17d7ea6f73b3001" - integrity sha512-XSjvyQWATM8uk+EJZvYna8D21kOXC42lwb3q4K70btuGieKlCIQLaHTTDV2OfD4+JfT4o3NJy3I4Td2co31RZA== +"@mui/base@5.0.0-alpha.114": + version "5.0.0-alpha.114" + resolved "https://registry.yarnpkg.com/@mui/base/-/base-5.0.0-alpha.114.tgz#19125f28b7d09d1cc60550872440ecba699d8374" + integrity sha512-ZpsG2I+zTOAnVTj3Un7TxD2zKRA2OhEPGMcWs/9ylPlS6VuGQSXowPooZiqarjT7TZ0+1bOe8titk/t8dLFiGw== dependencies: "@babel/runtime" "^7.20.7" "@emotion/is-prop-valid" "^1.2.0" @@ -1867,10 +1867,10 @@ prop-types "^15.8.1" react-is "^18.2.0" -"@mui/core-downloads-tracker@^5.11.4": - version "5.11.4" - resolved "https://registry.yarnpkg.com/@mui/core-downloads-tracker/-/core-downloads-tracker-5.11.4.tgz#def5937e21443b197fd1998fd66721bd9c49a1bb" - integrity sha512-jWVwGM3vG4O0sXcW0VcIl+njCWbGCBF5vvjRpuKJajrz51AD7D6+fP1SkInZXVk5pRHf6Bnk/Yj9Of9gXxb/hA== +"@mui/core-downloads-tracker@^5.11.5": + version "5.11.5" + resolved "https://registry.yarnpkg.com/@mui/core-downloads-tracker/-/core-downloads-tracker-5.11.5.tgz#473c9b918d974f03acc07d29ce467bb91eba13c6" + integrity sha512-MIuWGjitOsugpRhp64CQY3ZEVMIu9M/L9ioql6QLSkz73+bGIlC9FEhfi670/GZ8pQIIGmtiGGwofYzlwEWjig== "@mui/icons-material@^5.11.0": version "5.11.0" @@ -1880,14 +1880,14 @@ "@babel/runtime" "^7.20.6" "@mui/material@^5.11.4": - version "5.11.4" - resolved "https://registry.yarnpkg.com/@mui/material/-/material-5.11.4.tgz#4dda0f993c9aa9678e1b9bce16adfe11e984dbd4" - integrity sha512-ZL/czK9ynrQJ6uyDwQgK+j7m1iKA1XKPON+rEPupwAu/bJ1XJxD+H/H2bkMM8UpOkzaucx/WuMbJJGQ60l7gBg== + version "5.11.5" + resolved "https://registry.yarnpkg.com/@mui/material/-/material-5.11.5.tgz#b4867b4a6f3289e41f70b4393c075a799be8d24b" + integrity sha512-5fzjBbRYaB5MoEpvA32oalAWltOZ3/kSyuovuVmPc6UF6AG42lTtbdMLpdCygurFSGUMZYTg4Cjij52fKlDDgg== dependencies: "@babel/runtime" "^7.20.7" - "@mui/base" "5.0.0-alpha.113" - "@mui/core-downloads-tracker" "^5.11.4" - "@mui/system" "^5.11.4" + "@mui/base" "5.0.0-alpha.114" + "@mui/core-downloads-tracker" "^5.11.5" + "@mui/system" "^5.11.5" "@mui/types" "^7.2.3" "@mui/utils" "^5.11.2" "@types/react-transition-group" "^4.4.5" @@ -1916,10 +1916,10 @@ csstype "^3.1.1" prop-types "^15.8.1" -"@mui/system@^5.11.4": - version "5.11.4" - resolved "https://registry.yarnpkg.com/@mui/system/-/system-5.11.4.tgz#a097d6451e12ac442a92ca6e9717b6b8e68ecd45" - integrity sha512-fE2Ts33V5zh7ouciwXgMm/a6sLvjIj9OMeojuHNYY7BStTxparC/Fp9CNUZNJwt76U6ZJC59aYScFSRQKbW08g== +"@mui/system@^5.11.5": + version "5.11.5" + resolved "https://registry.yarnpkg.com/@mui/system/-/system-5.11.5.tgz#c880199634708c866063396f88d3fdd4c1dfcb48" + integrity sha512-KNVsJ0sgRRp2XBqhh4wPS5aacteqjwxgiYTVwVnll2fgkgunZKo3DsDiGMrFlCg25ZHA3Ax58txWGE9w58zp0w== dependencies: "@babel/runtime" "^7.20.7" "@mui/private-theming" "^5.11.2" @@ -2347,9 +2347,9 @@ "@types/react" "*" "@types/react@*": - version "18.0.26" - resolved "https://registry.yarnpkg.com/@types/react/-/react-18.0.26.tgz#8ad59fc01fef8eaf5c74f4ea392621749f0b7917" - integrity sha512-hCR3PJQsAIXyxhTNSiDFY//LhnMZWpNNr5etoCqx/iUfGc5gXWtQR2Phl908jVR6uPXacojQWTg4qRpkxTuGug== + version "18.0.27" + resolved "https://registry.yarnpkg.com/@types/react/-/react-18.0.27.tgz#d9425abe187a00f8a5ec182b010d4fd9da703b71" + integrity sha512-3vtRKHgVxu3Jp9t718R9BuzoD4NcQ8YJ5XRzsSKxNDiDonD2MXIT1TmSkenxuCycZJoQT5d2vE8LwWJxBC1gmA== dependencies: "@types/prop-types" "*" "@types/scheduler" "*" @@ -2412,9 +2412,9 @@ integrity sha512-iO9ZQHkZxHn4mSakYV0vFHAVDyEOIJQrV2uZ06HxEPcx+mt8swXoZHIbaaJ2crJYFfErySgktuTZ3BeLz+XmFA== "@types/yargs@^17.0.8": - version "17.0.19" - resolved "https://registry.yarnpkg.com/@types/yargs/-/yargs-17.0.19.tgz#8dbecdc9ab48bee0cb74f6e3327de3fa0d0c98ae" - integrity sha512-cAx3qamwaYX9R0fzOIZAlFpo4A+1uBVCxqpKz9D26uTF4srRXaGTTsikQmaotCtNdbhzyUH7ft6p9ktz9s6UNQ== + version "17.0.20" + resolved "https://registry.yarnpkg.com/@types/yargs/-/yargs-17.0.20.tgz#107f0fcc13bd4a524e352b41c49fe88aab5c54d5" + integrity sha512-eknWrTHofQuPk2iuqDm1waA7V6xPlbgBoaaXEgYkClhLOnB0TtbW+srJaOToAgawPxPlHQzwypFA2bhZaUGP5A== dependencies: "@types/yargs-parser" "*" @@ -2880,9 +2880,9 @@ body-parser@1.20.1: unpipe "1.0.0" bonjour-service@^1.0.11: - 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version "6.0.0" - resolved "https://registry.yarnpkg.com/serialize-javascript/-/serialize-javascript-6.0.0.tgz#efae5d88f45d7924141da8b5c3a7a7e663fefeb8" - integrity sha512-Qr3TosvguFt8ePWqsvRfrKyQXIiW+nGbYpy8XK24NQHE83caxWt+mIymTT19DGFbNWNLfEwsrkSmN64lVWB9ag== + version "6.0.1" + resolved "https://registry.yarnpkg.com/serialize-javascript/-/serialize-javascript-6.0.1.tgz#b206efb27c3da0b0ab6b52f48d170b7996458e5c" + integrity sha512-owoXEFjWRllis8/M1Q+Cw5k8ZH40e3zhp/ovX+Xr/vi1qj6QesbyXXViFbpNvWvPNAD62SutwEXavefrLJWj7w== dependencies: randombytes "^2.1.0"