From df1252e4483fa56f4adfa6195edbe17e09331e94 Mon Sep 17 00:00:00 2001 From: Colin Date: Fri, 6 Jul 2018 09:00:56 -0500 Subject: [PATCH] Update release-notes.md --- release-notes.md | 18 ++++++++++++++++++ 1 file changed, 18 insertions(+) diff --git a/release-notes.md b/release-notes.md index b9c3ca5d7d..566794c124 100644 --- a/release-notes.md +++ b/release-notes.md @@ -1,5 +1,23 @@ {{$NEXT}} +## Minor improvements + + * Added support for the CSI index format for VCF and BAM files! This format enables genomes + with chromosomes longer than a gigabase to be used in JBrowse. To enable, use the + `csiUrlTemplate` config to point to the file. Thanks to Keiran Raine and others for + motivating this! (issue #926, pull #1086, @cmdcolin) + + * Added a `dontRedispatch` option for GFF3Tabix stores. Example: set `dontRedispatch=region` + if there are `region` biotype features in the GFF that do not have subfeatures which will + speed up loading times significantly (issue #1076, pull #1084, @cmdcolin) + + * Add auto-lower-casing to the feature.get('...') function, commonly used for callback + customizations. Now, for example, feature.get('ID') works as well as feature.get('id'). + Thanks to @nvteja for motivating this! (issue #1068, pull #1074, @cmdcolin) + + * Added cache-busting for track config files which actively prevents stale configuration files + from being loaded (pull #1080, @cmdcolin) + ## Bug fixes * Fixed a memory leak that was introduced in JBrowse 1.13.1 in generate-names.pl. Thanks to