Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

special detail view for genes #174

Open
rbuels opened this issue Nov 19, 2012 · 3 comments
Open

special detail view for genes #174

rbuels opened this issue Nov 19, 2012 · 3 comments
Labels
feature req this adds new functionality to JBrowse 1 high priority related to a high-level project goal

Comments

@rbuels
Copy link
Collaborator

rbuels commented Nov 19, 2012

If a feature is of type mRNA or gene, show a special detail dialog that has features optimized for genes.

Including:

  • CDS sequence
  • toggle introns on/off
  • functional annotation features - link to GO terms, Interpro, etc
@rbuels rbuels added the feature req this adds new functionality to JBrowse 1 label Jan 28, 2018
@cmdcolin cmdcolin mentioned this issue Jun 21, 2018
Closed
@nathanhaigh
Copy link
Contributor

Issue regarding better out-of-the-box support for Dbxref and Ontology_term linking: #1089

@cmdcolin
Copy link
Contributor

Mailing list requested that protein sequence would also be a good addition https://sourceforge.net/p/gmod/mailman/message/36364918/

@loraine-gueguen
Copy link
Contributor

Would be useful to be able to get the protein sequence from the (sub)features of type CDS and exon too (not only gene and mRNA).

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
feature req this adds new functionality to JBrowse 1 high priority related to a high-level project goal
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
4 participants
@rbuels @nathanhaigh @cmdcolin @loraine-gueguen