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Modification to colour scheme for multi-segment reads + fix for filtering of unmapped reads #443

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merged 5 commits into from Feb 27, 2014

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keiranmraine commented Feb 12, 2014

As discussed. New tracks added to volvox dataset to aid checking of sanity. All the reads are named to indicate which flags are set.

keiranmraine added some commits Feb 10, 2014

Added volvox-paired SNPcoverage test track
Added filters for unmapped reads that have mapped-mate coordinate
Updated colour scheme for multi-segment sequencing
	all-mapped f/r		: light red/blue
	all-mapped-proper f/r	: original red/blue
	next seg unmapped f/r	: hard red/blue
	all-mapped diff seq f/r	: black/grey

@rbuels rbuels added this to the Release 1.11.3 milestone Feb 12, 2014

@rbuels rbuels self-assigned this Feb 27, 2014

@rbuels rbuels merged commit cba2767 into GMOD:master Feb 27, 2014

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