perSVade: personalized Structural Variation detection
This is the Karyon Pipeline
This is the Haplotypo repository
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
Script for counting human and fungal reads
Evolcust retrieves groups of genes that appear clustered together in groups of species
C. orthopsilosis ASE
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Conda recipes for the bioconda channel.
Allele Specific Expression classified by Bayesian inference
PhylomeDB automated pipeline for reconstructing high-quality phylogenetic tree
Abaccus pipeline for detection of HGT events
An automated pipeline for the identification of phylogenetically informative marker genes given as output a number of proteomes
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