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  • University of Iceland
  • Reykjavik, Iceland



Pinned repositories

  1. pmelsted/bifrost

    Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs

    C++ 49 1

  2. BloomFilterTrie

    An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.

    C 27 6

  3. DARRC

    DARRC is a new alignment-free and reference-free compression method that addresses the problem of pan-genome compression by encoding the sequences of a pan-genome as a guided de Bruijn Graph. The n…

    C 6 1

  4. BlastGraph

    BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented graph and a set of query sequences, it detects paths in the…


198 contributions in the last year

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Contribution activity

November 2018

GuillaumeHolley has no activity yet for this period.

October 2018

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