HASTE-project

Repositories

• k8s-deployments

  Deployment and configuration scripts for the image processing pipeline application at https://github.com/HASTE-project/cellprofiler-pipeline.
  Shell BSD-3-Clause 2 0 2 0 Updated Apr 11, 2021

• spark-hdfs-deployment

  Ansible playbooks and roles for the HASTE pipeline
  0 0 1 0 Updated Mar 8, 2021

• haste-agent

  Desktop application which streams new/modified files to the HASTE Cloud - intended for microscopes
  Python BSD-3-Clause 0 1 0 0 Updated Feb 15, 2021

• haste-gateway

  Web gateway for the HASTE Cloud
  Python BSD-3-Clause 0 0 0 0 Updated Feb 7, 2021

• cellprofiler-pipeline

  Kubernetes-based pipeline for CellProfiler
  Python BSD-3-Clause 1 0 3 0 Updated Jan 25, 2021

• HasteStorageClient

  Forked from benblamey/HasteStorageClient

  Client for HASTE Storage Engine
  Python BSD-3-Clause 2 0 0 0 Updated Jan 25, 2021

• haste-report-generator

  Tool to generate report of stream processing
  Python BSD-3-Clause 0 0 0 0 Updated Aug 4, 2020

• bin-packing-paper

  Repo for bin packing paper
  Scala 0 0 0 0 Updated Jul 2, 2020

• HarmonicIO

  Forked from beirbear/HarmonicIO

  Lightweight stream processing engine for scientific data
  Python 5 1 9 2 Updated Jul 2, 2020

• HarmonicPE

  Forked from beirbear/HarmonicPE

  Processing Daemon for HarmonicIO
  Python 2 1 0 1 Updated Jan 6, 2020

• haste-image-analysis-container2

  HASTE Image Analysis Container - intended for direct K8 deployment (without HIO)
  Python 1 0 0 0 Updated Mar 2, 2019

• haste-image-analysis-container

  Forked from Hakanwie/haste_example_processing_node

  HASTE example processing node, using Harmonic IO streaming connector and Haste Storage Client
  Python 2 0 0 2 Updated Jan 30, 2019

• HarmonicIOSetup

  Forked from benblamey/HarmonicIOSetup

  Ansible playbooks for installing and starting Harmonic IO on a virtual environment
  Shell 3 1 0 0 Updated Jan 30, 2019

• windowed-conformal-model

  Conformal Model for Predicting Interestingness of Microscopy Images based on Windowed Analysis of Image Features
  Python 2 0 0 1 Updated Jan 30, 2019

• haste-ansible

  Ansible scripts for deployment of core HASTE Servers
  Shell BSD-3-Clause 0 0 0 0 Updated Jan 29, 2019

• HarmonicIO-supervisord-DEPRECATED Archived

  WIP supervisord for HIO
  Python 0 0 0 0 Updated Aug 21, 2018

• benchmarking-tools

  Tools for benchmarking the HASTE pipeline and associated software
  Python BSD-3-Clause 0 0 0 0 Updated May 2, 2018

• microscope-simulator

  Forked from LovisaLugnegard/exjobb

  Simulate a high-content imaging experiment
  Python 1 0 6 1 Updated Mar 18, 2018

• HarmonicSC-deprecated

  Forked from benblamey/HarmonicSC
  Python 2 0 0 0 Updated Dec 18, 2017

• dockercloud-rockmongo

  Forked from benblamey/dockercloud-rockmongo

  Run rockmongo
  PHP Apache-2.0 2 0 0 0 Updated Dec 8, 2017