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1. SCRMshaw_HD SCRMshaw_HD Public

   C++ 2 2

2. pCRMeval pCRMeval Public

   Pipeline for in silico evaluation of enhancer prediction tools when applied to the Drosophila melanogaster genome

   Python 1

3. OrthologyMapping OrthologyMapping Public

   HTML 1 1

4. post_processing_SCRMshaw_pipeline post_processing_SCRMshaw_pipeline Public

   This pipeline does some post processing on the SCRMshaw 10bp offsets output file and runs peaks calling algorithm (MACs) to get peaks.

   Python

5. top_N_peaks top_N_peaks Public

   This script will give you top good predictions based on the cutoff of peak's amplitude curve and SCRMshaw score curve.

   Python

6. dmel_training_sets dmel_training_sets Public

   Updated Training data for SCRMshaw

   Shell