From 4d4f7215c1b0e65b84dfdd992433edcac92728d8 Mon Sep 17 00:00:00 2001 From: hb Date: Sat, 7 Jul 2018 22:58:12 -0700 Subject: [PATCH] REVDEP: Ran revdep checks [ci skip] --- revdep/README.md | 21 +++++++++---------- revdep/problems.md | 52 +++++++++++++++------------------------------- 2 files changed, 27 insertions(+), 46 deletions(-) diff --git a/revdep/README.md b/revdep/README.md index 7f75c7a7..aa8ea270 100644 --- a/revdep/README.md +++ b/revdep/README.md @@ -13,13 +13,12 @@ # Dependencies -|package |old |new |Δ | -|:---------|:------|:----------|:--| -|future |1.8.1 |1.8.9-9000 |* | -|codetools |0.2-15 |0.2-15 | | -|digest |0.6.15 |0.6.15 | | -|globals |0.12.1 |0.12.1 | | -|listenv |0.7.0 |0.7.0 | | +|package |old |new |Δ | +|:-------|:------|:----------|:--| +|future |1.8.1 |1.8.9-9000 |* | +|digest |0.6.15 |0.6.15 | | +|globals |0.12.1 |0.12.1 | | +|listenv |0.7.0 |0.7.0 | | # Revdeps @@ -36,12 +35,12 @@ |package |version |error |warning |note | |:-----------------------------------------------|:----------|:------|:-------|:----| |[aroma.affymetrix](problems.md#aromaaffymetrix) |3.1.1 | | |1 | -|[aroma.core](problems.md#aromacore) |3.1.3 | | |2 | +|[aroma.core](problems.md#aromacore) |3.1.3 | | |1 | |[BAMBI](problems.md#bambi) |2.0.0 | | |1 | |batchtools |0.9.10 | | | | -|biotmle |1.4.0 | | | | +|[biotmle](problems.md#biotmle) |1.4.0 | | |1 | |[brms](problems.md#brms) |2.3.1 | | |1 | -|[civis](problems.md#civis) |1.5.0 | | |1 | +|civis |1.5.0 | | | | |[codebook](problems.md#codebook) |0.5.9 | | |3 | |doFuture |0.6.0 | | | | |drake |5.2.1 | | | | @@ -62,7 +61,7 @@ |[penaltyLearning](problems.md#penaltylearning) |2017.12.08 |__+1__ | | | |[phylolm](problems.md#phylolm) |2.6 | | |1 | |[promises](problems.md#promises) |1.0.1 | | |1 | -|[PSCBS](problems.md#pscbs) |0.63.0 | | |1 | +|PSCBS |0.63.0 | | | | |[QDNAseq](problems.md#qdnaseq) |1.16.0 | |1 | | |R.filesets |2.12.1 | | | | |[robotstxt](problems.md#robotstxt) |0.6.0 | |__+1__ | | diff --git a/revdep/problems.md b/revdep/problems.md index 0649b0d3..4a4755cf 100644 --- a/revdep/problems.md +++ b/revdep/problems.md @@ -6,9 +6,9 @@ Version: 3.1.1 * checking installed package size ... NOTE ``` - installed size is 12.0Mb + installed size is 5.9Mb sub-directories of 1Mb or more: - R 8.4Mb + R 2.4Mb help 1.1Mb testScripts 1.3Mb ``` @@ -25,13 +25,6 @@ Version: 3.1.3 ‘sfit’ ‘expectile’ ‘HaarSeg’ ‘mpcbs’ ``` -* checking installed package size ... NOTE - ``` - installed size is 5.9Mb - sub-directories of 1Mb or more: - R 4.8Mb - ``` - # BAMBI Version: 2.0.0 @@ -44,32 +37,35 @@ Version: 2.0.0 All declared Imports should be used. ``` -# brms +# biotmle -Version: 2.3.1 +Version: 1.4.0 ## In both -* checking installed package size ... NOTE +* checking R code for possible problems ... NOTE ``` - installed size is 6.7Mb - sub-directories of 1Mb or more: - R 3.5Mb - doc 2.4Mb + .biotmle: no visible global function definition for ‘new’ + Undefined global functions or variables: + new + Consider adding + importFrom("methods", "new") + to your NAMESPACE file (and ensure that your DESCRIPTION Imports field + contains 'methods'). ``` -# civis +# brms -Version: 1.5.0 +Version: 2.3.1 ## In both * checking installed package size ... NOTE ``` - installed size is 5.0Mb + installed size is 6.7Mb sub-directories of 1Mb or more: - R 2.9Mb - help 1.6Mb + R 3.5Mb + doc 2.4Mb ``` # codebook @@ -218,20 +214,6 @@ Version: 1.0.1 Package unavailable to check Rd xrefs: ‘purrr’ ``` -# PSCBS - -Version: 0.63.0 - -## In both - -* checking installed package size ... NOTE - ``` - installed size is 6.9Mb - sub-directories of 1Mb or more: - R 3.0Mb - data-ex 2.6Mb - ``` - # QDNAseq Version: 1.16.0