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:microscope: Scientific formulae for the Homebrew package manager
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travisCI travisCI: Improve testing strategy
.travis.yml travisCI: Install linxubrew dependencies
CONTRIBUTING.md CONTRIBUTING.md: add bottles, revision notes
README.md README.md: fix typo
a5.rb a5: add desc
abacas.rb ABACAS 1.3.1 (new formula)
abinit.rb remove root_url in bottle block
abyss-explorer.rb abyss-explorer: add desc
abyss.rb remove root_url in bottle block
ace-corrector.rb remove root_url in bottle block
adam.rb adam: add 0.13.0 bottle.
adol-c.rb remove root_url in bottle block
alembic.rb alembic: add 1.5.4 bottle.
alglib.rb alglib: fix version
allpaths-lg.rb allpaths-lg: add desc
alpscore.rb remove root_url in bottle block
amos.rb amos: add desc
analysis.rb remove root_url in bottle block
andi.rb remove root_url in bottle block
ann.rb remove root_url in bottle block
aragorn.rb remove root_url in bottle block
arb.rb remove root_url in bottle block
aribas.rb remove root_url in bottle block
armadillo.rb armadillo: update 5.400.2 bottle.
arow++.rb Batch convert http download urls from Google Code to https
arpack.rb arpack: update 3.2.0 bottle.
arrayfire.rb arrayfire: update 3.0.2 bottle.
art.rb Use pkgshare path
artemis.rb remove root_url in bottle block
ascii_plots.rb remove root_url in bottle block
asl.rb asl: update 2.0.3 bottle.
astral.rb Use pkgshare path
astrometry-net.rb astrometry-net: shorten desc
ate-pairing.rb remove root_url in bottle block
atomic-pseudopotential-engine.rb remove root_url in bottle block
atpdec.rb atpdec 1.7 (new formula)
atram.rb remove root_url in bottle block
augustus.rb remove root_url in bottle block
bact.rb Use pkgshare path
bali-phy.rb bali-phy: add 2.3.7 bottle.
bam-readcount.rb remove root_url in bottle block
bamhash.rb remove root_url in bottle block
bamtools.rb remove root_url in bottle block
bamutil.rb remove root_url in bottle block
barrnap.rb remove root_url in bottle block
bcalm.rb bcalm: remove invalid test
bcftools.rb Use pkgshare path
beagle.rb remove root_url in bottle block
beast.rb remove root_url in bottle block
bedops.rb remove root_url in bottle block
bedtools.rb remove root_url in bottle block
beetl.rb beetl: simplify fails_with
bfc.rb remove root_url in bottle block
bioawk.rb remove root_url in bottle block
biobloomtools.rb biobloomtools 2.0.12: Fix sha256
biocgal.rb biocgal 0.9.6-beta: New formula
bioformats-cpp.rb bioformats-cpp: update 5.1.3 bottle.
biointerchange.rb biointerchange 2.0.3+100
biopieces.rb biopieces 2291: New formula
biopp.rb remove root_url in bottle block
bitseq.rb bitseq: style cleanup
blasr.rb blasr: annotate clang failure with upstream bug
blast.rb remove root_url in bottle block
blat.rb remove root_url in bottle block
blaze-lib.rb blaze-lib: add 2.4 bottle.
bless.rb remove root_url in bottle block
blis.rb blis: new formula
boost-compute.rb boost-compute: add 0.4 bottle.
bowtie.rb Use pkgshare path
bowtie2.rb bowtie2: use recommended DSL
bpel2owfn.rb Use new-style test definitions
bpipe.rb remove root_url in bottle block
butterflow.rb remove root_url in bottle block
bwa.rb bwa: update 0.7.12 bottle for Linuxbrew.
bwtdisk.rb bwtdisk 0.9.0: New formula
cantera.rb remove root_url in bottle block
cap3.rb remove root_url in bottle block
ccfits.rb CCfits 2.4 w/ Mavericks patch
cd-hit.rb remove root_url in bottle block
cddlib.rb Use pkgshare path
cdo.rb cdo: update 1.6.9 bottle.
cdsclient.rb cdsclient: add 3.80 bottle.
cegma.rb remove root_url in bottle block
celera-assembler.rb remove root_url in bottle block
ceres-solver.rb remove root_url in bottle block
cerulean.rb cerulean 0.1: Requires numpy
cgap.rb use LanguageModuleRequirement
cgns.rb remove root_url in bottle block
circlator.rb circlator: add 0.14.2 bottle.
circos.rb remove root_url in bottle block
ckon.rb remove root_url in bottle block
clark.rb remove root_url in bottle block
clblas.rb remove root_url in bottle block
clfft.rb remove root_url in bottle block
clinfo.rb clinfo: add 2.0.15.03.24 bottle.
clonalframeml.rb remove root_url in bottle block
clustal-omega.rb remove root_url in bottle block
clustal-w.rb remove root_url in bottle block
cmdstan.rb cmdstan: add 2.7.0 bottle.
cminpack.rb cminpack 1.3.4
cmor.rb cmor: use pkgshare
coinmp.rb Bump revisions for new gcc lib paths
colpack.rb remove root_url in bottle block
consed.rb consed 28.0: Add tag bioinformatics
corset.rb remove root_url in bottle block
cppad.rb remove root_url in bottle block
crfsuite.rb crfsuite 0.12
crlibm.rb Crlibm: new formula
cuba.rb remove root_url in bottle block
cube.rb Bump fails_with clang
cufflinks.rb remove root_url in bottle block
cvblob.rb New formula: cvblob
cytoscape.rb cytoscape 3.2.1
dadadodo.rb dadadodo 1.04
daligner.rb daligner: update 1.0 bottle.
data-science-toolbox.rb Data-science-toolbox: update sha1.
datamash.rb remove root_url in bottle block
dazz_db.rb dazz_db: add 1.0 bottle.
dealii.rb remove root_url in bottle block
delly.rb delly: update 0.6.5 bottle.
dextractor.rb dextractor: add 1.0 bottle.
dgtal.rb dgtal: remove invalid test
diamond.rb remove root_url in bottle block
dotwrp.rb Bump revisions for new gcc lib paths
ds9.rb ds9 7.3.2 (new formula)
dsk.rb remove root_url in bottle block
dssp.rb remove root_url in bottle block
dwgsim.rb remove root_url in bottle block
dynare.rb dynare: modify build to require tex
ea-utils.rb ea-utils: add 1.1.2-806 bottle.
edena.rb edena 3.131028
edirect.rb remove root_url in bottle block
elemental.rb elemental: update 0.85 bottle.
elph.rb Bump fails_with clang
emboss.rb emboss: update mirrors
enblend-enfuse.rb enblend-enfuse: modernize deps
ensembl-tools.rb ensembl-tools: remove perl deps
etsf_io.rb remove root_url in bottle block
exabayes.rb Use pkgshare path
exonerate.rb exonerate: update 2.2.0 bottle.
express.rb remove root_url in bottle block
fann.rb Batch convert http download urls from SourceForge to https
fasta.rb remove root_url in bottle block
fastml.rb remove root_url in bottle block
fastq-tools.rb remove root_url in bottle block
fastqc.rb remove root_url in bottle block
fasttree.rb remove root_url in bottle block
fastuniq.rb remove root_url in bottle block
fastx_toolkit.rb fastx_toolkit: modernize autotools deps
fcgene.rb fcgene: update shasum
fermi.rb remove root_url in bottle block
fermi2.rb remove root_url in bottle block
fermikit.rb fermikit: update 0.13 bottle.
fgsl.rb remove root_url in bottle block
field3d.rb Use pkgshare path
flann.rb flann: add 1.8.4_1 bottle.
flash.rb remove root_url in bottle block
flint.rb remove root_url in bottle block
flux-simulator.rb remove root_url in bottle block
fqzcomp.rb remove root_url in bottle block
freec.rb remove root_url in bottle block
fsa.rb remove root_url in bottle block
fwdpp.rb fwdpp: update 0.3.6 bottle.
gaemr.rb remove root_url in bottle block
gal-sim.rb gal-sim v1.3.0.
galfit.rb Use pkgshare path
galib.rb galib: fix clang error with undeclared identifiers
gap.rb gap: update 4.7.8 bottle.
garli.rb garli 2.01: New formula
gatb.rb remove root_url in bottle block
gdcm.rb remove root_url in bottle block
geant.rb remove root_url in bottle block
geneid.rb Use pkgshare path
genet.rb genet: use spec deps
genewise.rb remove root_url in bottle block
genometools.rb genometools: update 1.5.6 bottle.
getdp.rb getdp: add 2.6.0 bottle.
gfan.rb gfan: use pkgshare
giira.rb giira 01.3
gingr.rb gingr: remove invalid test
glimmer3.rb Use pkgshare path
glimmerhmm.rb remove root_url in bottle block
glpk.rb remove root_url in bottle block
gmap-gsnap.rb remove root_url in bottle block
gmcloser.rb remove root_url in bottle block
gmsh.rb gmsh: update 2.10.0 bottle.
gmt.rb remove root_url in bottle block
gmt4.rb remove root_url in bottle block
gnudatalanguage.rb gnudatalanguage: update 0.9.5_1 bottle.
grabix.rb grabix: add desc
graph-tool.rb graph-tool: fix python3 build
graphlan.rb Use pkgshare path
gromacs.rb gromacs: add 5.0.6 bottle.
gtsam.rb remove root_url in bottle block
gubbins.rb gubbins: add 1.4.1 bottle.
h5utils.rb remove root_url in bottle block
harry.rb remove root_url in bottle block
harvest-tools.rb harvest-tools: update 1.2 bottle.
hdf5.rb remove root_url in bottle block
healpix.rb healpix: depends on pkg-config
hisat.rb remove root_url in bottle block
hlaminer.rb remove root_url in bottle block
hmmer.rb remove root_url in bottle block
hmmer2.rb remove root_url in bottle block
hopdm.rb remove root_url in bottle block
hotspot.rb hotspot: add 4.1.0 bottle.
htqc.rb remove root_url in bottle block
htsbox.rb htsbox: update r311 bottle.
htslib.rb Use pkgshare path
hwloc.rb hwloc: add --universal
hyphy.rb remove root_url in bottle block
hypre.rb hypre: update 2.10.0b bottle.
idba.rb remove root_url in bottle block
idcoefs.rb Batch convert http download urls from Google Code to https
igraph.rb remove root_url in bottle block
igv.rb remove root_url in bottle block
igvtools.rb igvtools: use pkgshare
infernal.rb remove root_url in bottle block
insighttoolkit.rb insighttoolkit: update 4.8.0 bottle.
inter-views.rb remove root_url in bottle block
ipopt.rb remove root_url in bottle block
itsol.rb itsol: fix version
iva.rb iva: update 1.0.0 bottle.
jblas.rb JBLAS: new formula.
jellyfish-1.1.rb remove root_url in bottle block
jellyfish.rb remove root_url in bottle block
jmol.rb jmol: fix homepage, version
joinx.rb JoinX: exit with error message on OSX.
kalign.rb Use new-style test definitions
kallisto.rb kallisto: update 0.42.2.1 bottle.
kat.rb remove root_url in bottle block
kent-tools.rb remove root_url in bottle block
kissplice.rb Bump fails_with clang
kmc.rb remove root_url in bottle block
kmergenie.rb remove root_url in bottle block
kmerstream.rb remove root_url in bottle block
kraken.rb remove root_url in bottle block
lammps.rb remove root_url in bottle block
lapack-manpages.rb New Recipe: BLAS and LAPACK manpages
last.rb remove root_url in bottle block
lastz.rb lastz 1.03.34
libccd.rb remove root_url in bottle block
libcerf.rb libcerf: add 1.4 bottle.
libctl.rb Libctl: New formula
libdivsufsort.rb remove root_url in bottle block
libfolia.rb libfolia: add 0.13 bottle.
libgpkg.rb libgpkg 0.9.16
liblbfgs.rb liblbfgs 1.10
libmatio.rb Batch convert http download urls from SourceForge to https
libpll.rb remove root_url in bottle block
libsbml.rb remove root_url in bottle block
libsequence.rb remove root_url in bottle block
libsigrokdecode.rb libsigrokdecode: remove dead code
lighter.rb lighter: update 1.0.7 bottle.
lightstringgraph.rb lightstringgraph 0.1.0: New formula
links-scaffolder.rb links-scaffolder 1.5.1
lis.rb remove root_url in bottle block
littler.rb remove root_url in bottle block
lmfit.rb Use pkgshare path
lmod.rb Lmod: 5.9.3
lobstr.rb lobstr: modernize autotools deps
lola.rb LoLA: Updated to LoLA 2.0
lp_solve.rb Fix Python support in lp_solve.py
lumpy-sv.rb lumpy-sv: update 0.2.11 bottle.
madlib.rb madlib: update 1.8 bottle.
mafft.rb remove root_url in bottle block
maker.rb maker 2.31.8
mallet.rb Streamline metafile installs
maq.rb remove root_url in bottle block
masurca.rb remove root_url in bottle block
mathgl.rb mathgl: update 2.3.3 bottle.
mathomatic.rb mathomatic: fix audit warning
maxima.rb remove root_url in bottle block
mbsystem.rb mbsystem: update 5.5.2252 bottle.
mcl.rb remove root_url in bottle block
megahit.rb Use pkgshare path
megam.rb Use stable opt paths
meme.rb remove root_url in bottle block
meraculous.rb meraculous 2.0.4: Fix for Linuxbrew with GCC 4.8
methpipe.rb methpipe 3.3.1 (new formula)
metis.rb remove root_url in bottle block
metis4.rb remove root_url in bottle block
mfusg.rb mfusg: use pkgshare
mhap.rb remove root_url in bottle block
minc.rb remove root_url in bottle block
minced.rb remove root_url in bottle block
minia.rb remove root_url in bottle block
mir-prefer.rb mir-prefer 0.19
mira.rb mira 4.0.2: Add doi and tag
mitofy.rb remove root_url in bottle block
mlpack.rb remove root_url in bottle block
mlst.rb remove root_url in bottle block
moab.rb remove root_url in bottle block
mpsolve.rb mpsolve: style nits
mrbayes.rb Use pkgshare path
mrfast.rb remove root_url in bottle block
mtl.rb MTL: upgrade to 4.0.9507.
multi-worm-tracker.rb remove root_url in bottle block
mummer.rb remove root_url in bottle block
mumps.rb mumps: update 5.0.1 bottle.
muscle.rb remove root_url in bottle block
musket.rb musket: fix version
nanopolish.rb remove root_url in bottle block
nauty.rb remove root_url in bottle block
ncbi-c++-toolkit.rb remove root_url in bottle block
ncl.rb ncl: update 2.1.18 bottle.
nco.rb remove root_url in bottle block
ncview.rb remove root_url in bottle block
netcdf.rb remove root_url in bottle block
neuron.rb remove root_url in bottle block
newick-utils.rb remove root_url in bottle block
newicktools.rb remove root_url in bottle block
nextflow.rb nextflow: update 0.15.1 bottle.
nexusformat.rb nexusformat: add make check
nfft.rb remove root_url in bottle block
niftilib.rb Batch convert http download urls from SourceForge to https
nip2.rb nip2: add 7.42.1 bottle.
nlopt.rb nlopt: update 2.4.2 bottle.
nonpareil.rb nonpareil: unbottle
novoalign.rb novoalign 3.02.13: Update style
numdiff.rb Numdiff 5.8.1 (new formula)
nusmv.rb nusmv: fix audit warnings
nxtrim.rb remove root_url in bottle block
oases.rb remove root_url in bottle block
oce.rb remove root_url in bottle block
octave.rb octave: update 3.8.2_2 bottle.
ogdraw.rb ogdraw 1.1.1: Use write_env_script to set PERL5LIB
openalpr.rb remove root_url in bottle block
openblas.rb remove root_url in bottle block
openbr.rb openbr: fix version
opencascade.rb remove root_url in bottle block
opencv.rb opencv: update 2.4.12 bottle.
opencv3.rb opencv3: update 3.0.0 bottle.
openfst.rb openfst: add 1.5.0 bottle.
opengrm-ngram.rb Move OpenFST, OpenGRM-ngram, and OpenGRM-thrax from core
opengrm-thrax.rb Move OpenFST, OpenGRM-ngram, and OpenGRM-thrax from core
openimageio.rb openimageio: update 1.5.14_1 bottle.
openmeeg.rb Convert remaining github tarball URLs to archive URLs
openni.rb openni: modernize autotools deps
openni2.rb "universal" is automatically passed to dependencies
orocos-kdl.rb remove root_url in bottle block
osgearth.rb remove root_url in bottle block
p4est.rb remove root_url in bottle block
pagan.rb remove root_url in bottle block
paml.rb Use pkgshare path
pandaseq.rb remove root_url in bottle block
paraview.rb remove root_url in bottle block
parmetis.rb parmetis: update 4.0.3_1 bottle.
parsnp.rb parsnp: remove bottle block
pastix.rb pastix: update 5.2.2.20_3 bottle.
pathd8.rb pathd8: add 1.0 bottle.
pathvisio.rb pathvisio: unbottle
pbsuite.rb pbsuite: Add dependency on blasr and python
pcap.rb pcap 2005-06-07: New formula
pcl.rb remove root_url in bottle block
pear.rb remove root_url in bottle block
perf.rb perf 5.11
petsc.rb Use pkgshare path
phipack.rb Use pkgshare path
phlawd.rb phlawd: add 3.4a bottle.
phylip.rb Use pkgshare path
phyml.rb phyml: add 20120412 bottle.
phyutility.rb phyutility 2.7.1 (new formula)
picard-tools.rb remove root_url in bottle block
piler.rb piler 1.0: New formula
platanus.rb remove root_url in bottle block
plink.rb remove root_url in bottle block
plink2.rb remove root_url in bottle block
pnapi.rb Use new-style test definitions
poa.rb remove root_url in bottle block
pocl.rb remove root_url in bottle block
populations.rb remove root_url in bottle block
poretools.rb poretools: update 0.5.1 bottle.
prank.rb remove root_url in bottle block
primer3.rb primer3: add 2.3.6 bottle.
prodigal.rb remove root_url in bottle block
prokka.rb prokka: Add postinstall to run prokka --setupdb
propack.rb remove root_url in bottle block
proteinortho.rb remove root_url in bottle block
proverif.rb remove root_url in bottle block
psmc.rb psmc: add 0.6.5 bottle.
pspp.rb remove root_url in bottle block
pulseview.rb Avoid "build.head?" in the DSL
pykep.rb pykep 1.2.1
pymol.rb remove root_url in bottle block
qcl.rb qcl: 0.6.4: a language for quantum computers
qgis.rb Fix audit warnings
qhull.rb qhull: update 2012.1 bottle.
qr_mumps.rb remove root_url in bottle block
qrupdate.rb remove root_url in bottle block
quake.rb remove root_url in bottle block
qualimap.rb remove root_url in bottle block
quast.rb quast: update 3.0 bottle.
quest.rb remove root_url in bottle block
quicktree.rb quicktree: new download url
quip.rb quip 1.1.8: New formula
quorum.rb quorum 1.0.0: New formula
r-gui.rb r-gui 1.65
r.rb r: update 3.2.2_1 bottle.
r8s.rb Use pkgshare path
radx.rb radx: update 20150808 bottle.
rainbow.rb Batch convert http download urls from SourceForge to https
rampart.rb remove root_url in bottle block
raxml.rb raxml 8.1.15
ray.rb remove root_url in bottle block
readseq.rb remove root_url in bottle block
readsim.rb remove root_url in bottle block
reapr.rb remove root_url in bottle block
recon.rb remove root_url in bottle block
repeatmasker.rb remove root_url in bottle block
repeatmodeler.rb remove root_url in bottle block
repeatscout.rb remove root_url in bottle block
rmblast.rb remove root_url in bottle block
rml-mmc.rb rml-mmc: reformat version
rna-star.rb remove root_url in bottle block
rnammer.rb remove root_url in bottle block
root.rb root: update 5.34.32 bottle.
root6.rb root6: update 6.04.00 bottle.
ropebwt.rb ropebwt 20130801: New formula
ropebwt2.rb ropebwt2 r181
rstudio-server.rb rstudio-server: add 0.99.473 bottle.
sailfish.rb sailfish: remove old clang build
sais.rb sais 2.4.1: New formula
sally.rb remove root_url in bottle block
salmon.rb remove root_url in bottle block
salt.rb salt: migrate from core
sambamba.rb sambamba: update 0.5.6 bottle.
samblaster.rb remove root_url in bottle block
samtools-0.1.rb remove root_url in bottle block
samtools.rb remove root_url in bottle block
sara.rb sara: use spec dependencies
sbagen.rb Optional resources do not need to be conditional
scalapack.rb scalapack: update 2.0.2_3 bottle.
scamp.rb remove root_url in bottle block
scarpa.rb remove root_url in bottle block
scotch.rb scotch: update 6.0.4 bottle.
scotch5.rb remove root_url in bottle block
seq-gen.rb Use new-style test definitions
seqan.rb remove root_url in bottle block
seqdb.rb remove root_url in bottle block
seqtk.rb remove root_url in bottle block
sextractor.rb sextractor 2.19.5
sfscode.rb sfscode: add 20140719 bottle.
sga.rb sga: modernize autotools deps
shogun.rb remove root_url in bottle block
shrimp.rb remove root_url in bottle block
sickle.rb remove root_url in bottle block
sigrok-cli.rb Avoid "build.head?" in the DSL
simpleitk.rb simpleitk: fix insighttoolkit dependency
simulate-pcr.rb Simulate-PCR 1.2 (new formula)
sisl.rb SISL 4.6.0 (new formula)
skewer.rb remove root_url in bottle block
slepc.rb Use pkgshare path
slicot.rb remove root_url in bottle block
sllib.rb Update sllib to 1.4.2f.
smalt.rb remove root_url in bottle block
smrtanalysis.rb smrtanalysis 2.2.0.133377: New formula
snap-aligner.rb remove root_url in bottle block
snap.rb remove root_url in bottle block
snid.rb remove root_url in bottle block
snoscan.rb snoscan 0.9b: New formula
snp_sites.rb snp_sites: use pkgshare
snpeff.rb snpeff: update 4.1g bottle.
soapdenovo.rb remove root_url in bottle block
spades.rb spades: add 3.6.0 bottle.
sparseassembler.rb remove root_url in bottle block
spatialite-gis.rb spatialite-gis: fix compilation with wxWidgets 3
squeezambler.rb squeezambler 2.0.3: New formula
sratoolkit.rb remove root_url in bottle block
ssake.rb remove root_url in bottle block
sspace-longread.rb sspace-longread 1-1
stacks.rb remove root_url in bottle block
statismo.rb remove root_url in bottle block
stiff.rb remove root_url in bottle block
stringtie.rb remove root_url in bottle block
suite-sparse.rb suite-sparse: update 4.4.4 bottle.
suite-sparse421.rb suite-sparse421: update 4.2.1 bottle.
sumo.rb remove root_url in bottle block
sundials.rb remove root_url in bottle block
superlu.rb remove root_url in bottle block
superlu_dist.rb superlu_dist: update 4.1 bottle.
swetest.rb swetest: update 2.01.00 bottle.
swrcfit.rb swrcfit 2.0
symphony.rb remove root_url in bottle block
t-coffee.rb t-coffee 10.00.r1613: New formula
tabix.rb tabix: conflicts with htslib
tabtk.rb tabtk: fix r9 url
tasr.rb remove root_url in bottle block
tbl2asn.rb remove root_url in bottle block
tetgen.rb tetgen 1.5.0
therion.rb Therion: style adjustments.
ticcutils.rb Migrate ticcutils, timbl, wopr from core.
timbl.rb Migrate ticcutils, timbl, wopr from core.
tisean.rb remove root_url in bottle block
tmv-cpp.rb Use new-style test definitions
topcat.rb Install jar files in share.
tophat.rb remove root_url in bottle block
trans-abyss.rb use LanguageModuleRequirement
transdecoder.rb remove root_url in bottle block
transpose.rb remove root_url in bottle block
transrate-tools.rb remove root_url in bottle block
transtermhp.rb Use new-style test definitions
trf.rb Add DOI
triangle.rb triangle: Depends on X11
trilinos.rb Trilinos 12.0.1
trimadap.rb remove root_url in bottle block
trimal.rb trimal: update 1.4.1 bottle.
trimmomatic.rb remove root_url in bottle block
trinity.rb remove root_url in bottle block
trnascan.rb Add DOI
ucsc-genome-browser.rb ucsc-genome-browser 316
ucto.rb ucto: add 0.8.0 bottle.
unafold.rb unafold: update urls
uniqtag.rb uniqtag: Add DOI
uproc.rb remove root_url in bottle block
utgb.rb Use new-style test definitions
vague.rb VAGUE 1.0.5 (new formula)
varscan.rb VarScan 2.3.7 (new formula)
vcake.rb remove root_url in bottle block
vcfanno.rb remove root_url in bottle block
vcflib.rb remove root_url in bottle block
vcftools.rb vcftools: update 0.1.13 bottle.
veclibfort.rb remove root_url in bottle block
velvet.rb remove root_url in bottle block
velvetoptimiser.rb Use new-style test definitions
viennarna.rb remove root_url in bottle block
vigra.rb vigra: modernize deps
vips.rb remove root_url in bottle block
vips7.rb remove root_url in bottle block
vislcg3.rb vislcg3: add 10800 bottle.
visp.rb remove root_url in bottle block
voro++.rb Use new-style test definitions
vtk.rb vtk: fix audit warnings
vtk5.rb remove root_url in bottle block
wcslib.rb remove root_url in bottle block
wcstools.rb remove root_url in bottle block
weblogo.rb Use pkgshare path
wfdb.rb wfdb: update 10.5.24 bottle.
wopr.rb Migrate ticcutils, timbl, wopr from core.
wxmaxima.rb remove root_url in bottle block
xbyak.rb xbyak 4.70 (new formula)
xmgredit.rb xmgredit: add 5_1 bottle.
xmi-msim.rb remove root_url in bottle block
xraylib.rb remove root_url in bottle block
xrmc.rb remove root_url in bottle block
xylib.rb Xylib: new formula.
yaggo.rb remove root_url in bottle block
yaha.rb Use pkgshare path
yass.rb yass: add 1.14 bottle.
yeppp.rb Use pkgshare path
z3.rb z3: update 4.4.0_1 bottle.
zoltan.rb remove root_url in bottle block

README.md

Homebrew Science

For science.

These formulæ provide software tailored to scientific endeavours. Need to store large amounts of data in a sparse matrix, solve a huge optimization problem or process the images from your space telescope? Maybe we can help!

How do I install these formulæ?

brew install homebrew/science/<formula>

Or brew tap homebrew/science and then brew install <formula>.

Troubleshooting

IMPORTANT First read the Troubleshooting Checklist.

Use brew gist-logs <formula> to create a Gist and post the link in your issue.

Search open and closed issues. See also Homebrew's Common Issues and FAQ.

Documentation

brew help, man brew or check Homebrew's documentation.

Contributing

Please see the contributing guide.

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