Ontologiebasierte Navigation für CION
Switch branches/tags
Nothing to show
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
src
Bundle.eml
Bundle.iml
CIONW.userlibraries
LICENSE
README.md
pom.xml

README.md

Description

CIONo is a prototype of an graph pathfinding plugin for Cytoscape intended for ontologies.

For more information, see Anatoli Zeiser's Master's Thesis.

Requirements

Running: Java 8 JRE

Compiling: Java 8 SDK, Maven

Installation

  1. Create the jar with mvn package or download it from a release
  2. Run Cytoscape and enable the plugin via Apps-> App Manager -> Install from File...

Support

As a research prototype for a masters's thesis, we cannot offer support for CIONo. It was tested with Cytoscape 3.4.0 and may not work with other future versions. The author of the thesis and the prototype is Anatoli Zeiser, but he finished University and probably does not have time to support it as well but we will ask him if there are issues in the tracker. Nevertheless you are free to participate in the project and we will merge pull requests.

Licensing

We absolutely encorage you to use, extend or do whatever you want with the code in conformance to the GNU GPL v3.0. If you need different licensing, please contact Anatoli Zeiser.