[2023-08-18T18:45:57.665+0000] [Payara 6.2023.8] [WARNING] [AS-EJB-00056] [jakarta.enterprise.ejb.container] [tid: _ThreadID=227 _ThreadName=__ejb-thread-pool13] [timeMillis: 1692384357665] [levelValue: 900] [[ A system exception occurred during an invocation on EJB ImportServiceBean, method: public edu.harvard.iq.dataverse.Dataset edu.harvard.iq.dataverse.api.imports.ImportServiceBean.doImportHarvestedDataset(edu.harvard.iq.dataverse.engine.command.DataverseRequest,edu.harvard.iq.dataverse.harvest.client.HarvestingClient,java.lang.String,java.lang.String,java.io.File,java.util.Date,java.io.PrintWriter) throws edu.harvard.iq.dataverse.api.imports.ImportException,java.io.IOException]] [2023-08-18T18:45:57.665+0000] [Payara 6.2023.8] [WARNING] [] [jakarta.enterprise.ejb.container] [tid: _ThreadID=227 _ThreadName=__ejb-thread-pool13] [timeMillis: 1692384357665] [levelValue: 900] [[ jakarta.ejb.EJBException: Cannot invoke "jakarta.json.JsonString.getString()" because the return value of "org.eclipse.parsson.JsonObjectBuilderImpl$JsonObjectImpl.getJsonString(String)" is null at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:723) at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:652) at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:492) at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4601) at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2134) at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2104) at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:90) at jdk.proxy73/jdk.proxy73.$Proxy316.doImportHarvestedDataset(Unknown Source) at edu.harvard.iq.dataverse.api.imports.__EJB31_Generated__ImportServiceBean__Intf____Bean__.doImportHarvestedDataset(Unknown Source) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.processRecord(HarvesterServiceBean.java:313) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.harvestOAI(HarvesterServiceBean.java:259) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.doHarvest(HarvesterServiceBean.java:175) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.doAsyncHarvest(HarvesterServiceBean.java:104) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:588) at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:408) at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4835) at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:653) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:834) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) at jdk.internal.reflect.GeneratedMethodAccessor222.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at org.jboss.weld.module.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:81) at org.jboss.weld.module.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) at jdk.internal.reflect.GeneratedMethodAccessor196.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:375) at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4807) at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4795) at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) at java.base/java.lang.Thread.run(Thread.java:833) Caused by: java.lang.NullPointerException: Cannot invoke "jakarta.json.JsonString.getString()" because the return value of "org.eclipse.parsson.JsonObjectBuilderImpl$JsonObjectImpl.getJsonString(String)" is null at org.eclipse.parsson.JsonObjectBuilderImpl$JsonObjectImpl.getString(JsonObjectBuilderImpl.java:264) at edu.harvard.iq.dataverse.util.json.JsonParser.parseControlledVocabularyValue(JsonParser.java:963) at edu.harvard.iq.dataverse.util.json.JsonParser.parseField(JsonParser.java:752) at edu.harvard.iq.dataverse.util.json.JsonParser.parseCompoundValue(JsonParser.java:792) at edu.harvard.iq.dataverse.util.json.JsonParser.parseField(JsonParser.java:745) at edu.harvard.iq.dataverse.util.json.JsonParser.parseFieldsFromArray(JsonParser.java:528) at edu.harvard.iq.dataverse.util.json.JsonParser.parseMetadataBlocks(JsonParser.java:505) at edu.harvard.iq.dataverse.util.json.JsonParser.parseDatasetVersion(JsonParser.java:425) at edu.harvard.iq.dataverse.util.json.JsonParser.parseDataset(JsonParser.java:335) at edu.harvard.iq.dataverse.api.imports.ImportServiceBean.doImportHarvestedDataset(ImportServiceBean.java:269) at jdk.internal.reflect.GeneratedMethodAccessor1625.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:588) at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:408) at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4835) at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:653) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:834) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) at jdk.internal.reflect.GeneratedMethodAccessor222.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at org.jboss.weld.module.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:72) at org.jboss.weld.module.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) at jdk.internal.reflect.GeneratedMethodAccessor196.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:375) at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4807) at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4795) at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) ... 40 more ]] [2023-08-18T18:45:57.667+0000] [Payara 6.2023.8] [SEVERE] [] [] [tid: _ThreadID=227 _ThreadName=__ejb-thread-pool13] [timeMillis: 1692384357667] [levelValue: 1000] [[ jakarta.ejb.EJBException: Cannot invoke "jakarta.json.JsonString.getString()" because the return value of "org.eclipse.parsson.JsonObjectBuilderImpl$JsonObjectImpl.getJsonString(String)" is null at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:723) at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:652) at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:492) at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4601) at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2134) at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2104) at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220) at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:90) at jdk.proxy73/jdk.proxy73.$Proxy316.doImportHarvestedDataset(Unknown Source) at edu.harvard.iq.dataverse.api.imports.__EJB31_Generated__ImportServiceBean__Intf____Bean__.doImportHarvestedDataset(Unknown Source) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.processRecord(HarvesterServiceBean.java:313) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.harvestOAI(HarvesterServiceBean.java:259) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.doHarvest(HarvesterServiceBean.java:175) at edu.harvard.iq.dataverse.harvest.client.HarvesterServiceBean.doAsyncHarvest(HarvesterServiceBean.java:104) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:588) at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:408) at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4835) at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:653) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:834) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) at jdk.internal.reflect.GeneratedMethodAccessor222.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at org.jboss.weld.module.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:81) at org.jboss.weld.module.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) at jdk.internal.reflect.GeneratedMethodAccessor196.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:375) at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4807) at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4795) at com.sun.ejb.containers.EjbAsyncTask.call(EjbAsyncTask.java:101) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) at java.base/java.lang.Thread.run(Thread.java:833) Caused by: java.lang.NullPointerException: Cannot invoke "jakarta.json.JsonString.getString()" because the return value of "org.eclipse.parsson.JsonObjectBuilderImpl$JsonObjectImpl.getJsonString(String)" is null at org.eclipse.parsson.JsonObjectBuilderImpl$JsonObjectImpl.getString(JsonObjectBuilderImpl.java:264) at edu.harvard.iq.dataverse.util.json.JsonParser.parseControlledVocabularyValue(JsonParser.java:963) at edu.harvard.iq.dataverse.util.json.JsonParser.parseField(JsonParser.java:752) at edu.harvard.iq.dataverse.util.json.JsonParser.parseCompoundValue(JsonParser.java:792) at edu.harvard.iq.dataverse.util.json.JsonParser.parseField(JsonParser.java:745) at edu.harvard.iq.dataverse.util.json.JsonParser.parseFieldsFromArray(JsonParser.java:528) at edu.harvard.iq.dataverse.util.json.JsonParser.parseMetadataBlocks(JsonParser.java:505) at edu.harvard.iq.dataverse.util.json.JsonParser.parseDatasetVersion(JsonParser.java:425) at edu.harvard.iq.dataverse.util.json.JsonParser.parseDataset(JsonParser.java:335) at edu.harvard.iq.dataverse.api.imports.ImportServiceBean.doImportHarvestedDataset(ImportServiceBean.java:269) at jdk.internal.reflect.GeneratedMethodAccessor1625.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:588) at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:408) at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4835) at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:653) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:834) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163) at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140) at jdk.internal.reflect.GeneratedMethodAccessor222.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:603) at org.jboss.weld.module.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:72) at org.jboss.weld.module.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52) at jdk.internal.reflect.GeneratedMethodAccessor196.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:568) at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888) at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833) at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:375) at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4807) at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4795) at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212) ... 40 more ]]