xsl transformation from various XML format to ISA-Tab
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biocrates
bruker
fuge
sra
ISA.xsd
LICENSE
README.md

README.md

xslt2isa

Date: 2014-10-15

Content: xsl stylesheet for Biocrates XML documents comlpying with schema xmlns="http://www.biocrates.com/metstat/result/xml_1.0"

Task: Creates 'ISA-Tab File' required for a submission to EMBL-EBI Metabolights repository [1] of Metabolomics Data from Biocrates XML documents compliant to Biocrates xsd 1.0 [2].

Note: This is an XSL 2.0 transformation and requires Saxon-PE-9.5.1.5 to run.

Biocrates test files: IMGUS_mouse_sample_data_4MetaboLights V6 only Last Run no BCAA-PRSmod.xml

Author: Philippe Rocca-Serra ORCID: Affiliation: ISA Team, University of Oxford e-Reseach Centre Email: philippe.rocca-serra@oerc.ox.ac.uk WebSite: http://isa-tools.org Code Repository: https://github.com/ISA-tools/xslt2isa

Licence: CC-BY-SA 4.0 Version: rc1.0 DOI: