diff --git a/.github/workflows/validate-zenodo.yaml b/.github/workflows/validate-zenodo.yaml new file mode 100644 index 0000000..cb4ee12 --- /dev/null +++ b/.github/workflows/validate-zenodo.yaml @@ -0,0 +1,23 @@ +name: Check zenodo metadata + +on: + push: + paths: + - '.zenodo.json' + - '.github/workflows/validate-zenodo.yaml' + +jobs: + check-zenodo-metadata: + + runs-on: ubuntu-latest + + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-node@v4 + with: + node-version: '22' + - name: Install dependencies + run: npm install zenodraft@0.14.1 + - name: Check .zenodo.json file + run: | + npx zenodraft metadata validate .zenodo.json diff --git a/.zenodo.json b/.zenodo.json new file mode 100644 index 0000000..53c7852 --- /dev/null +++ b/.zenodo.json @@ -0,0 +1,62 @@ +{ + "creators": [ + { + "name": "Campolongo, Elizabeth", + "orcid": "0000-0003-0846-2413", + "affiliation": "The Ohio State University" + }, + { + "name": "Thompson, Matthew", + "orcid": "0000-0003-0583-8585", + "affiliation": "The Ohio State University" + }, + { + "name": "Zhang, Net", + "orcid": "0000-0003-2664-451X", + "affiliation": "The Ohio State University" + }, + { + "name": "Duan, Yuehua", + "orcid": "0000-0002-8547-5907", + "affiliation": "The Ohio State University" + }, + { + "name": "Bradley, John", + "orcid": "0000-0003-3858-848X", + "affiliation": "Duke University" + }, + { + "name": "Lapp, Hilmar", + "orcid": "0000-0001-9107-0714", + "affiliation": "Duke University" + } + ], + "description": "

Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows. 

\n

The website hosts Imageomics-focused guides to FAIR (findable, accessible, interoperable, reusable) and reproducible workflows, documentation, and general best-practices for collaborative science. We aim to provide a helpful resource for scientists working in imageomics and related interdisciplinary fields.

\n

Website: imageomics.github.io/Imageomics-guide/

This guide houses the information needed to get started with and use Imageomics Institute resources readily available to all members. However, most of this guide is applicable to anyone working more broadly in the field of imageomics or adjacent fields of computer and data science, and it is tailored to help domain scientists bridging that gap.

", + "keywords": [ + "imageomics", + "metadata", + "guide", + "best practices", + "cheat-sheet", + "command line cheat-sheet", + "collaborative science", + "projects", + "collaborative workflows", + "standards" + ], + "title": "Imageomics Guide", + "version": "2.3.0", + "license": "CC0-1.0", + "publication_date": "2025-12-04", + "grants": [ + { + "id": "021nxhr62::2118240" + }, + { + "id": "021nxhr62::2330423" + } + ], + "references": [ + "Campolongo, E. G., Thompson, M. J., Zhang, N., Duan, Y., Bradley, J., Zarubiieva, I., Taylor, G., & Lapp, H. (2025). Collaborative Distributed Science Guide (Version 1.3.0) [Computer software]. https://doi.org/10.5281/zenodo.17210328" + ] +} diff --git a/CITATION.cff b/CITATION.cff index 4f9b9dc..e112fd3 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -10,7 +10,7 @@ authors: given-names: Net orcid: "https://orcid.org/0000-0003-2664-451X" - family-names: "Duan" - given-names: "Zoe" + given-names: "Yuehua" orcid: "https://orcid.org/0000-0002-8547-5907" - family-names: "Bradley" given-names: "John" @@ -19,14 +19,14 @@ authors: given-names: "Hilmar" orcid: "https://orcid.org/0000-0001-9107-0714" cff-version: 1.2.0 -date-released: "2025-10-29" +date-released: "2025-12-04" identifiers: - - description: "The GitHub release URL of tag v2.2.0." + - description: "The GitHub release URL of tag v2.3.0." type: url - value: "https://github.com/Imageomics/Imageomics-guide/releases/tag/v2.2.0" - - description: "The GitHub URL of the commit tagged with v2.2.0." + value: "https://github.com/Imageomics/Imageomics-guide/releases/tag/v2.3.0" + - description: "The GitHub URL of the commit tagged with v2.3.0." type: url - value: "https://github.com/Imageomics/Imageomics-guide/tree/d92d47601651ee55054169de26c6879fbe711953" + value: "https://github.com/Imageomics/Imageomics-guide/tree/" # Update on release keywords: - imageomics - metadata @@ -42,36 +42,4 @@ license: CC0-1.0 message: "If you find these docs helpful in your research, please cite them as below." repository-code: "https://github.com/Imageomics/Imageomics-guide" title: "Imageomics Guide" -version: "2.2.0" -references: - - authors: - - family-names: "Campolongo" - given-names: "Elizabeth G." - orcid: "https://orcid.org/0000-0003-0846-2413" - - family-names: "Thompson" - given-names: "Matthew J." - orcid: "https://orcid.org/0000-0003-0583-8585" - - family-names: Zhang - given-names: Net - orcid: "https://orcid.org/0000-0003-2664-451X" - - family-names: "Duan" - given-names: "Zoe" - orcid: "https://orcid.org/0000-0002-8547-5907" - - family-names: "Bradley" - given-names: "John" - orcid: "https://orcid.org/0000-0003-3858-848X" - - family-names: Zarubiieva - given-names: Iuliia - orcid: "https://orcid.org/0009-0007-1597-8684" - - family-names: Taylor - given-names: Graham - orcid: "https://orcid.org/0000-0001-5867-3652" - - family-names: "Lapp" - given-names: "Hilmar" - orcid: "https://orcid.org/0000-0001-9107-0714" - date-released: "2025-10-29" - license: CC0-1.0 - repository-code: "https://github.com/Imageomics/Collaborative-distributed-science-guide" - title: "Collaborative Distributed Science Guide" - version: 1.2.1 - doi: "10.5281/zenodo.17210328" +version: "2.3.0"