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23 changes: 23 additions & 0 deletions .github/workflows/validate-zenodo.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,23 @@
name: Check zenodo metadata

on:
push:
paths:
- '.zenodo.json'
- '.github/workflows/validate-zenodo.yaml'

jobs:
check-zenodo-metadata:

runs-on: ubuntu-latest

steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: '22'
- name: Install dependencies
run: npm install zenodraft@0.14.1
- name: Check .zenodo.json file
run: |
npx zenodraft metadata validate .zenodo.json
62 changes: 62 additions & 0 deletions .zenodo.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,62 @@
{
"creators": [
{
"name": "Campolongo, Elizabeth",
"orcid": "0000-0003-0846-2413",
"affiliation": "The Ohio State University"
},
{
"name": "Thompson, Matthew",
"orcid": "0000-0003-0583-8585",
"affiliation": "The Ohio State University"
},
{
"name": "Zhang, Net",
"orcid": "0000-0003-2664-451X",
"affiliation": "The Ohio State University"
},
{
"name": "Duan, Yuehua",
"orcid": "0000-0002-8547-5907",
"affiliation": "The Ohio State University"
},
{
"name": "Bradley, John",
"orcid": "0000-0003-3858-848X",
"affiliation": "Duke University"
},
{
"name": "Lapp, Hilmar",
"orcid": "0000-0001-9107-0714",
"affiliation": "Duke University"
}
],
"description": "<p>Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows.&nbsp;</p>\n<p>The website hosts Imageomics-focused guides to FAIR (findable, accessible, interoperable, reusable) and reproducible workflows, documentation, and general best-practices for collaborative science. We aim to provide a helpful resource for scientists working in <a href=\"https://imageomics.github.io/Imageomics-guide/wiki-guide/Glossary-for-Imageomics/#imageomics\"><em>imageomics</em></a> and related interdisciplinary fields.</p>\n<p>Website: <a href=\"https://imageomics.github.io/Imageomics-guide/\">imageomics.github.io/Imageomics-guide/</a></p> <p>This guide houses the information needed to get started with and use Imageomics Institute resources readily available to all members. However, most of this guide is applicable to anyone working more broadly in the field of imageomics or adjacent fields of computer and data science, and it is tailored to help domain scientists bridging that gap.</p>",
"keywords": [
"imageomics",
"metadata",
"guide",
"best practices",
"cheat-sheet",
"command line cheat-sheet",
"collaborative science",
"projects",
"collaborative workflows",
"standards"
],
"title": "Imageomics Guide",
"version": "2.3.0",
"license": "CC0-1.0",
"publication_date": "2025-12-04",
"grants": [
{
"id": "021nxhr62::2118240"
},
{
"id": "021nxhr62::2330423"
}
],
"references": [
"Campolongo, E. G., Thompson, M. J., Zhang, N., Duan, Y., Bradley, J., Zarubiieva, I., Taylor, G., & Lapp, H. (2025). Collaborative Distributed Science Guide (Version 1.3.0) [Computer software]. https://doi.org/10.5281/zenodo.17210328"
]
}
46 changes: 7 additions & 39 deletions CITATION.cff
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ authors:
given-names: Net
orcid: "https://orcid.org/0000-0003-2664-451X"
- family-names: "Duan"
given-names: "Zoe"
given-names: "Yuehua"
orcid: "https://orcid.org/0000-0002-8547-5907"
- family-names: "Bradley"
given-names: "John"
Expand All @@ -19,14 +19,14 @@ authors:
given-names: "Hilmar"
orcid: "https://orcid.org/0000-0001-9107-0714"
cff-version: 1.2.0
date-released: "2025-10-29"
date-released: "2025-12-04"
identifiers:
- description: "The GitHub release URL of tag v2.2.0."
- description: "The GitHub release URL of tag v2.3.0."
type: url
value: "https://github.com/Imageomics/Imageomics-guide/releases/tag/v2.2.0"
- description: "The GitHub URL of the commit tagged with v2.2.0."
value: "https://github.com/Imageomics/Imageomics-guide/releases/tag/v2.3.0"
- description: "The GitHub URL of the commit tagged with v2.3.0."
type: url
value: "https://github.com/Imageomics/Imageomics-guide/tree/d92d47601651ee55054169de26c6879fbe711953"
value: "https://github.com/Imageomics/Imageomics-guide/tree/<commit-hash>" # Update on release
keywords:
- imageomics
- metadata
Expand All @@ -42,36 +42,4 @@ license: CC0-1.0
message: "If you find these docs helpful in your research, please cite them as below."
repository-code: "https://github.com/Imageomics/Imageomics-guide"
title: "Imageomics Guide"
version: "2.2.0"
references:
- authors:
- family-names: "Campolongo"
given-names: "Elizabeth G."
orcid: "https://orcid.org/0000-0003-0846-2413"
- family-names: "Thompson"
given-names: "Matthew J."
orcid: "https://orcid.org/0000-0003-0583-8585"
- family-names: Zhang
given-names: Net
orcid: "https://orcid.org/0000-0003-2664-451X"
- family-names: "Duan"
given-names: "Zoe"
orcid: "https://orcid.org/0000-0002-8547-5907"
- family-names: "Bradley"
given-names: "John"
orcid: "https://orcid.org/0000-0003-3858-848X"
- family-names: Zarubiieva
given-names: Iuliia
orcid: "https://orcid.org/0009-0007-1597-8684"
- family-names: Taylor
given-names: Graham
orcid: "https://orcid.org/0000-0001-5867-3652"
- family-names: "Lapp"
given-names: "Hilmar"
orcid: "https://orcid.org/0000-0001-9107-0714"
date-released: "2025-10-29"
license: CC0-1.0
repository-code: "https://github.com/Imageomics/Collaborative-distributed-science-guide"
title: "Collaborative Distributed Science Guide"
version: 1.2.1
doi: "10.5281/zenodo.17210328"
version: "2.3.0"