Skip to content
View IndraGonz's full-sized avatar

Block or report IndraGonz

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

Popular repositories Loading

  1. CLARC CLARC Public

    Tool to refine accessory and core COG definitions of a pangenome analysis using linkage in a given population of samples

    Python 9

  2. nfds-tutorial nfds-tutorial Public

    Tutorial that shows the bioinformatics and modeling workflow that we use to study Negative Frequency Dependent Selection (NFDS) in the best bacteria: Streptococcus pneumoniae. Have fun!

    Jupyter Notebook 1

  3. 2024_GonzalezOjeda_CLARC 2024_GonzalezOjeda_CLARC Public

    Code corresponding to the paper: Linkage-based ortholog refinement in bacterial pangenomes with CLARC (2024)

    Jupyter Notebook

  4. 2026_GonzalezOjeda_DefSystems_NFDS 2026_GonzalezOjeda_DefSystems_NFDS Public

    Code corresponding to the paper: Frequency-dependent dynamics shape phage defense diversity in natural pneumococcal populations (2026)

    Perl