:: Synchronizing package databases... archlinuxcn 0.0 B 0.00 B/s 00:00 [----------------------] 0% archlinuxcn 665.2 KiB 1109 KiB/s 00:00 [#########-------------] 41% archlinuxcn 1338.8 KiB 1862 KiB/s 00:00 [##################----] 83% archlinuxcn 1594.0 KiB 3.34 MiB/s 00:00 [######################] 100% core is up to date extra is up to date community is up to date :: Starting full system upgrade... resolving dependencies... looking for conflicting packages... Packages (1) systemd-libs-git-248.rc2.r173.g275334c562-1 Total Download Size: 0.54 MiB Total Installed Size: 1.72 MiB Net Upgrade Size: 0.00 MiB :: Proceed with installation? [Y/n] :: Retrieving packages... systemd-libs-git... 0.0 B 0.00 B/s 00:00 [----------------------] 0% systemd-libs-git... 555.2 KiB 3.39 MiB/s 00:00 [######################] 100% (0/1) checking keys in keyring [----------------------] 0% (1/1) checking keys in keyring [######################] 100% (0/1) checking package integrity [----------------------] 0% (1/1) checking package integrity [######################] 100% (0/1) loading package files [----------------------] 0% (1/1) loading package files [######################] 100% (0/1) checking for file conflicts [----------------------] 0% (1/1) checking for file conflicts [######################] 100% :: Processing package changes... (1/1) upgrading systemd-libs-git [----------------------] 0% (1/1) upgrading systemd-libs-git [######################] 100% ==> Building in chroot for [archlinuxcn] (x86_64)... ==> Synchronizing chroot copy [/var/lib/archbuild/archlinuxcn-x86_64/root] -> [hubutui]...done ==> Making package: python-itk 5.2rc03-1 (Fri Mar 5 13:48:51 2021) ==> Retrieving sources... -> Found ITKPythonPackage-5.2rc03.tar.gz ==> Validating source files with sha512sums... ITKPythonPackage-5.2rc03.tar.gz ... Passed ==> Making package: python-itk 5.2rc03-1 (Fri 05 Mar 2021 01:48:56 PM CST) ==> Checking runtime dependencies... ==> Installing missing dependencies... resolving dependencies... looking for conflicting packages... Packages (6) blas-3.9.0-3 cblas-3.9.0-3 lapack-3.9.0-3 libnsl-1.3.0-1 python-3.9.2-1 python-numpy-1.20.1-1 Total Installed Size: 115.52 MiB :: Proceed with installation? 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python-numpy python-nose: testsuite openblas: faster linear algebra ==> Checking buildtime dependencies... ==> Installing missing dependencies... resolving dependencies... looking for conflicting packages... Packages (21) cmake-3.19.6-1 jsoncpp-1.9.4-1 libuv-1.41.0-1 pcre2-10.36-1 perl-error-0.17029-2 perl-mailtools-2.21-4 perl-timedate-2.33-2 python-appdirs-1.4.4-3 python-distro-1.5.0-3 python-ordered-set-4.0.2-3 python-packaging-20.9-1 python-pyparsing-2.4.7-3 python-six-1.15.0-3 python-wheel-0.36.2-1 rhash-1.4.1-1 shared-mime-info-2.0+57+gc1d1c70-1 doxygen-1.9.1-1 git-2.30.1-1 ninja-1.10.2-1 python-scikit-build-0.11.1-3 python-setuptools-1:53.1.0-1 Total Installed Size: 109.07 MiB :: Proceed with installation? 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( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [----------------------] 0% ( 1/21) installing doxygen [######################] 100% Optional dependencies for doxygen graphviz: for caller/callee graph generation qt5-base: for doxywizard ( 2/21) installing perl-error [----------------------] 0% ( 2/21) installing perl-error [######################] 100% ( 3/21) installing perl-timedate [----------------------] 0% ( 3/21) installing perl-timedate [######################] 100% ( 4/21) installing perl-mailtools [----------------------] 0% ( 4/21) installing perl-mailtools [######################] 100% ( 5/21) installing pcre2 [----------------------] 0% ( 5/21) installing pcre2 [######################] 100% ( 6/21) installing git [----------------------] 0% ( 6/21) installing git [######################] 100% Optional dependencies for git tk: gitk and git gui perl-libwww: git svn perl-term-readkey: git svn and interactive.singlekey setting perl-mime-tools: git send-email perl-net-smtp-ssl: git send-email TLS support perl-authen-sasl: git send-email TLS support perl-mediawiki-api: git mediawiki support perl-datetime-format-iso8601: git mediawiki support perl-lwp-protocol-https: git mediawiki https support perl-cgi: gitweb (web interface) support python: git svn & git p4 [installed] subversion: git svn org.freedesktop.secrets: keyring credential helper libsecret: libsecret credential helper [installed] ( 7/21) installing ninja [----------------------] 0% ( 7/21) installing ninja [######################] 100% ( 8/21) installing python-appdirs [----------------------] 0% ( 8/21) installing python-appdirs [######################] 100% ( 9/21) installing python-pyparsing [----------------------] 0% ( 9/21) installing python-pyparsing [######################] 100% (10/21) installing python-six [----------------------] 0% (10/21) installing python-six [######################] 100% (11/21) installing python-packaging [----------------------] 0% (11/21) installing python-packaging [######################] 100% (12/21) installing python-ordered-set [----------------------] 0% (12/21) installing python-ordered-set [######################] 100% (13/21) installing python-setuptools [----------------------] 0% (13/21) installing python-setuptools [######################] 100% (14/21) installing shared-mime-info [----------------------] 0% (14/21) installing shared-mime-info [######################] 100% (15/21) installing jsoncpp [----------------------] 0% (15/21) installing jsoncpp [######################] 100% Optional dependencies for jsoncpp jsoncpp-doc: documentation (16/21) installing libuv [----------------------] 0% (16/21) installing libuv [######################] 100% (17/21) installing rhash [----------------------] 0% (17/21) installing rhash [######################] 100% (18/21) installing cmake [----------------------] 0% (18/21) installing cmake [##################----] 85% (18/21) installing cmake [######################] 100% Optional dependencies for cmake qt5-base: cmake-gui (19/21) installing python-distro [----------------------] 0% (19/21) installing python-distro [######################] 100% (20/21) installing python-wheel [----------------------] 0% (20/21) installing python-wheel [######################] 100% Optional dependencies for python-wheel python-xdg: for wheel.signatures (21/21) installing python-scikit-build [----------------------] 0% (21/21) installing python-scikit-build [######################] 100% :: Running post-transaction hooks... (1/2) Warn about old perl modules (2/2) Updating the MIME type database... ==> Retrieving sources...  -> Found ITKPythonPackage-5.2rc03.tar.gz ==> WARNING: Skipping all source file integrity checks. ==> Extracting sources...  -> Extracting ITKPythonPackage-5.2rc03.tar.gz with bsdtar ==> Starting build()... Not searching for unused variables given on the command line. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 10.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- The CXX compiler identification is GNU 10.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done -- Generating done -- Build files have been written to: /build/python-itk/src/ITKPythonPackage-5.2rc03/_cmake_test_compile/build -- The CXX compiler identification is GNU 10.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- SuperBuild - ITKPythonPackage_WHEEL_NAME:itk -- SuperBuild - -- SuperBuild - ITK-source-download -- SuperBuild - ITK_SOURCE_DIR: /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITK -- SuperBuild - ITK-source-download[OK] -- SuperBuild - -- SuperBuild - Searching for python -- Found Python3: /usr/bin/python3.9 (found version "3.9.2") found components: Interpreter Development Development.Module Development.Embed -- Found Doxygen: /usr/bin/doxygen (found version "1.9.1") found components: doxygen missing components: dot -- SuperBuild - Python3_INCLUDE_DIR: -- SuperBuild - Python3_INCLUDE_DIRS: /usr/include/python3.9 -- SuperBuild - Python3_LIBRARY: -- SuperBuild - Python3_EXECUTABLE: /usr/bin/python3.9 -- SuperBuild - Searching for python[OK] -- SuperBuild - DOXYGEN_EXECUTABLE: /usr/bin/doxygen -- ITK CMake Cache Args - -- SuperBuild - -- SuperBuild - ITK => Requires ITK-source-download -- SuperBuild - ITK_BINARY_DIR: /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb -- SuperBuild - ITK[OK] -- SuperBuild - -- SuperBuild - ITKPythonPackage => Requires ITK -- SuperBuild - ITKPythonPackage[OK] -- Configuring done -- Generating done -- Build files have been written to: /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build [1/25] Creating directories for 'ITK-source-download' [1/25] Performing download step (git clone) for 'ITK-source-download' Cloning into 'ITK'... Note: switching to 'v5.2rc03'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at d6951962a4 ENH: Content link synchronization for v5.2rc03 [3/25] Performing update step for 'ITK-source-download' [4/25] No patch step for 'ITK-source-download' [5/25] No configure step for 'ITK-source-download' [6/25] No build step for 'ITK-source-download' [7/25] No install step for 'ITK-source-download' [8/25] Completed 'ITK-source-download' [9/25] Creating directories for 'ITK' [9/25] No download step for 'ITK' [10/25] No update step for 'ITK' [12/25] No patch step for 'ITK' [12/25] Performing configure step for 'ITK' -- The CXX compiler identification is GNU 10.2.0 -- The C compiler identification is GNU 10.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found Git: /usr/bin/git (found version "2.30.1") -- Performing Test C_HAS_WARNING-Wno-uninitialized -- Performing Test C_HAS_WARNING-Wno-uninitialized - Success -- Performing Test C_HAS_WARNING-Wno-unused-parameter -- Performing Test C_HAS_WARNING-Wno-unused-parameter - Success -- Performing Test C_HAS_WARNING-Wall -- Performing Test C_HAS_WARNING-Wall - Success -- Performing Test C_HAS_WARNING-Wno-long-double -- Performing Test C_HAS_WARNING-Wno-long-double - Failed -- Performing Test C_HAS_WARNING-Wcast-align -- Performing Test C_HAS_WARNING-Wcast-align - Success -- Performing Test C_HAS_WARNING-Wdisabled-optimization -- Performing Test C_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test C_HAS_WARNING-Wextra -- Performing Test C_HAS_WARNING-Wextra - Success -- Performing Test C_HAS_WARNING-Wformat_2 -- Performing Test C_HAS_WARNING-Wformat_2 - Success -- Performing Test C_HAS_WARNING-Winvalid-pch -- Performing Test C_HAS_WARNING-Winvalid-pch - Success -- Performing Test C_HAS_WARNING-Wno-format-nonliteral -- Performing Test C_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test C_HAS_WARNING-Wpointer-arith -- Performing Test C_HAS_WARNING-Wpointer-arith - Success -- Performing Test C_HAS_WARNING-Wshadow -- Performing Test C_HAS_WARNING-Wshadow - Success -- Performing Test C_HAS_WARNING-Wunused -- Performing Test C_HAS_WARNING-Wunused - Success -- Performing Test C_HAS_WARNING-Wwrite-strings -- Performing Test C_HAS_WARNING-Wwrite-strings - Success -- Performing Test C_HAS_WARNING-funit-at-a-time -- Performing Test C_HAS_WARNING-funit-at-a-time - Success -- Performing Test C_HAS_WARNING-Wno-strict-overflow -- Performing Test C_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wall -- Performing Test CXX_HAS_WARNING-Wall - Success -- Performing Test CXX_HAS_WARNING-Wno-long-double -- Performing Test CXX_HAS_WARNING-Wno-long-double - Failed -- Performing Test CXX_HAS_WARNING-Wcast-align -- Performing Test CXX_HAS_WARNING-Wcast-align - Success -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test CXX_HAS_WARNING-Wextra -- Performing Test CXX_HAS_WARNING-Wextra - Success -- Performing Test CXX_HAS_WARNING-Wformat_2 -- Performing Test CXX_HAS_WARNING-Wformat_2 - Success -- Performing Test CXX_HAS_WARNING-Winvalid-pch -- Performing Test CXX_HAS_WARNING-Winvalid-pch - Success -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test CXX_HAS_WARNING-Wpointer-arith -- Performing Test CXX_HAS_WARNING-Wpointer-arith - Success -- Performing Test CXX_HAS_WARNING-Wshadow -- Performing Test CXX_HAS_WARNING-Wshadow - Success -- Performing Test CXX_HAS_WARNING-Wunused -- Performing Test CXX_HAS_WARNING-Wunused - Success -- Performing Test CXX_HAS_WARNING-Wwrite-strings -- Performing Test CXX_HAS_WARNING-Wwrite-strings - Success -- Performing Test CXX_HAS_WARNING-funit-at-a-time -- Performing Test CXX_HAS_WARNING-funit-at-a-time - Success -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wno-deprecated -- Performing Test CXX_HAS_WARNING-Wno-deprecated - Success -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof - Success -- Performing Test CXX_HAS_WARNING-Wno-undefined-var-template -- Performing Test CXX_HAS_WARNING-Wno-undefined-var-template - Failed -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual - Success -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel - Success -- Performing Test C_HAS_WARNING-mtune_generic -- Performing Test C_HAS_WARNING-mtune_generic - Success -- Performing Test C_HAS_WARNING-march_corei7 -- Performing Test C_HAS_WARNING-march_corei7 - Success -- Performing Test CXX_HAS_WARNING-mtune_generic -- Performing Test CXX_HAS_WARNING-mtune_generic - Success -- Performing Test CXX_HAS_WARNING-march_corei7 -- Performing Test CXX_HAS_WARNING-march_corei7 - Success -- Performing Test CXX_HAS_DISABLE_OPTIMIZATION_FLAG -- Performing Test CXX_HAS_DISABLE_OPTIMIZATION_FLAG - Failed -- Running module dependency checks -- Enabled ITKAnisotropicSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKAntiAlias, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKBiasCorrection, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKBinaryMathematicalMorphology, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKBridgeNumPy, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKClassifiers, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKColormap, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKConnectedComponents, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKConvolution, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKCurvatureFlow, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDICOMParser, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDeconvolution, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDeformableMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDenoising, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDiffusionTensorImage, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDisplacementField, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDistanceMap, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDoubleConversion, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKEigen, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKEigen3, needed by [ITKCommon]. -- Enabled ITKExpat, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFFT, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFastMarching, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFiniteDifference, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGDCM, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGIFTI, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUAnisotropicSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUFiniteDifference, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUImageFilterBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUPDEDeformableRegistration, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPURegistrationCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUThresholding, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGoogleTest, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKHDF5, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOBMP, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOBioRad, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOBruker, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOCSV, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOGDCM, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOGE, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOGIPL, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOHDF5, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOIPL, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOImageBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOJPEG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOJPEG2000, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOLSM, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMINC, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMRC, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshBYU, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshFreeSurfer, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshGifti, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshOBJ, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshOFF, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeshVTK, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeta, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIONIFTI, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIONRRD, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOPNG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIORAW, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOSiemens, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOSpatialObjects, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOStimulate, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTIFF, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformHDF5, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformInsightLegacy, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformMatlab, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOVTK, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOXML, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageAdaptors, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageCompare, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageCompose, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFeature, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFilterBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFrequency, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFunction, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFusion, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageGradient, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageGrid, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageIntensity, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageLabel, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageNoise, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageSources, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageStatistics, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIntegratedTest, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKJPEG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKKLMRegionGrowing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKKWIML, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKKWSys, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLIBLBFGS, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLabelMap, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLabelVoting, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLevelSets, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLevelSetsv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMINC, needed by [ITKIOMINC]. -- Enabled ITKMarkovRandomFieldsClassifiers, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMathematicalMorphology, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMetaIO, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMetricsv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNIFTI, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNarrowBand, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNetlib, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNrrdIO, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKOpenJPEG, needed by [ITKIOJPEG2000]. -- Enabled ITKOptimizers, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKOptimizersv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPDEDeformableRegistration, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPNG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPath, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPolynomials, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKQuadEdgeMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKQuadEdgeMeshFiltering, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKRegionGrowing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKRegistrationCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKRegistrationMethodsv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSignedDistanceFunction, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSpatialFunction, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSpatialObjects, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKStatistics, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSuperPixel, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTIFF, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTestKernel, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKThresholding, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTransform, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTransformFactory, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVNL, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVNLInstantiation, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVTK, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVideoCore, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVideoFiltering, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVideoIO, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVoronoi, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKWatersheds, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKZLIB, requested by ITK_BUILD_DEFAULT_MODULES. -- Double correction test returned: 89255.0/1e22 = 8.9255e-18 -- Checking whether wstring is available -- Checking whether wstring is available - yes -- Checking whether C compiler has ptrdiff_t in stddef.h -- Checking whether C compiler has ptrdiff_t in stddef.h - yes -- Checking whether C compiler has ssize_t in unistd.h -- Checking whether C compiler has ssize_t in unistd.h - yes -- Checking whether C compiler has clock_gettime -- Checking whether C compiler has clock_gettime - yes -- Checking whether CXX compiler has setenv -- Checking whether CXX compiler has setenv - yes -- Checking whether CXX compiler has unsetenv -- Checking whether CXX compiler has unsetenv - yes -- Checking whether CXX compiler has environ in stdlib.h -- Checking whether CXX compiler has environ in stdlib.h - no -- Checking whether CXX compiler has utimes -- Checking whether CXX compiler has utimes - yes -- Checking whether CXX compiler has utimensat -- Checking whether CXX compiler has utimensat - yes -- Checking whether CXX compiler struct stat has st_mtim member -- Checking whether CXX compiler struct stat has st_mtim member - yes -- Checking whether CXX compiler struct stat has st_mtimespec member -- Checking whether CXX compiler struct stat has st_mtimespec member - no -- Looking for include files sys/types.h, ifaddrs.h -- Looking for include files sys/types.h, ifaddrs.h - found -- Checking whether CXX compiler has rlimit64 -- Checking whether CXX compiler has rlimit64 - yes -- Looking for C++ include execinfo.h -- Looking for C++ include execinfo.h - found -- Checking whether backtrace works with this C++ compiler -- Checking whether backtrace works with this C++ compiler - yes -- Looking for C++ include dlfcn.h -- Looking for C++ include dlfcn.h - found -- Checking whether dladdr works with this C++ compiler -- Checking whether dladdr works with this C++ compiler - yes -- Looking for C++ include cxxabi.h -- Looking for C++ include cxxabi.h - found -- Checking whether cxxabi works with this C++ compiler -- Checking whether cxxabi works with this C++ compiler - yes -- Checking whether CXX compiler has getloadavg -- Checking whether CXX compiler has getloadavg - yes -- Checking whether is available -- Checking whether is available - yes -- Adding -fPIC compiler flag to generate position independent code. -- Performing Test VXL_UNISTD_USLEEP_IS_VOID -- Performing Test VXL_UNISTD_USLEEP_IS_VOID - Success -- Performing Test VCL_HAS_LFS -- Performing Test VCL_HAS_LFS - Success -- Performing Test VXL_HAS_DBGHELP_H -- Performing Test VXL_HAS_DBGHELP_H - Failed -- Performing Test VXL_PIC_COMPATIBLE -- Performing Test VXL_PIC_COMPATIBLE - Success -- Looking for C++ include emmintrin.h -- Looking for C++ include emmintrin.h - found -- Looking for include file assert.h -- Looking for include file assert.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file semaphore.h -- Looking for include file semaphore.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file limits.h -- Looking for include file limits.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file search.h -- Looking for include file search.h - found -- Looking for include file stdint.h -- Looking for include file stdint.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Performing Test VXL_HAS_SSE2_HARDWARE_SUPPORT -- Performing Test VXL_HAS_SSE2_HARDWARE_SUPPORT - Success -- Performing Test VXL_HAS_MM_MALLOC -- Performing Test VXL_HAS_MM_MALLOC - Success -- Performing Test VXL_HAS_ALIGNED_MALLOC -- Performing Test VXL_HAS_ALIGNED_MALLOC - Failed -- Performing Test VXL_HAS_MINGW_ALIGNED_MALLOC -- Performing Test VXL_HAS_MINGW_ALIGNED_MALLOC - Failed -- Performing Test VXL_HAS_POSIX_MEMALIGN -- Performing Test VXL_HAS_POSIX_MEMALIGN - Failed -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Looking for 8-bit int. [Checking char...] -- Looking for 8-bit int. Found char. -- Looking for 8-bit int. [Checking short...] -- Looking for 8-bit int. [Checking char...] -- Looking for 8-bit int. Found char. -- Looking for 16-bit int. [Checking char...] -- Looking for 16-bit int. [Checking int...] -- Looking for 16-bit int. [Checking short...] -- Looking for 16-bit int. Found short. -- Looking for 32-bit int. [Checking short...] -- Looking for 32-bit int. [Checking long...] -- Looking for 32-bit int. [Checking int...] -- Looking for 32-bit int. Found int. -- Looking for 64-bit int. [Checking __int64...] -- Looking for 64-bit int. [Checking long long...] -- Looking for 64-bit int. [Checking long...] -- Looking for 64-bit int. Found long. -- Looking for 32-bit float. [Checking long double...] -- Looking for 32-bit float. [Checking double...] -- Looking for 32-bit float. [Checking float...] -- Looking for 32-bit float. Found float. -- Looking for 64-bit float. [Checking float...] -- Looking for 64-bit float. [Checking long double...] -- Looking for 64-bit float. [Checking double...] -- Looking for 64-bit float. Found double. -- Looking for 96-bit float. [Checking float...] -- Looking for 96-bit float. [Checking double...] -- Looking for 96-bit float. [Checking long double...] -- Looking for 96-bit float. Not found. -- Looking for 128-bit float. [Checking float...] -- Looking for 128-bit float. [Checking double...] -- Looking for 128-bit float. [Checking long double...] -- Looking for 128-bit float. Found long double. -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for useconds_t -- Looking for useconds_t - found -- Looking for intptr_t -- Looking for intptr_t - found -- Looking for ualarm -- Looking for ualarm - found -- Looking for usleep -- Looking for usleep - found -- Looking for lchown -- Looking for lchown - found -- Looking for pread -- Looking for pread - found -- Looking for pwrite -- Looking for pwrite - found -- Looking for tell -- Looking for tell - not found -- Looking for getpid -- Looking for getpid - found -- Looking for gethostname -- Looking for gethostname - found -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Checking to see if this platform has the __FUNCTION__ C-Preprocessor directive -- Checking to see if this platform supports has the __FUNCTION__ C-Preprocessor directive - yes -- Looking for include file fenv.h -- Looking for include file fenv.h - found -- Looking for include file emmintrin.h -- Looking for include file emmintrin.h - found -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_64 -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_64 - Success -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_32 -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_32 - Success -- Performing Test ITK_COMPILER_DOES_NOT_NEED_MSSE2_FLAG -- Performing Test ITK_COMPILER_DOES_NOT_NEED_MSSE2_FLAG - Success -- Performing Test ITK_PRIVATE_DYNAMIC_CAST - Success -- Performing Test gcc_has_no_associative_math -- Performing Test gcc_has_no_associative_math - Success -- Check size of off64_t -- Check size of off64_t - done -- Looking for unistd.h -- Looking for unistd.h - found -- Check for STD namespace -- Check for STD namespace - found -- Looking for stdint.h -- Looking for stdint.h - found -- Performing Test _HAS_fno-ipa-cp-clone -- Performing Test _HAS_fno-ipa-cp-clone - Success -- Looking for inttypes.h -- Looking for inttypes.h - found -- Found ZLIB: itkzlib -- Found EXPAT: ITKEXPAT -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for stdlib.h -- Looking for stdlib.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Looking for string.h -- Looking for string.h - found -- Looking for memory.h -- Looking for memory.h - found -- Looking for stdio.h -- Looking for stdio.h - found -- Looking for math.h -- Looking for math.h - found -- Looking for float.h -- Looking for float.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for ctype.h -- Looking for ctype.h - found -- Looking for assert.h -- Looking for assert.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for inttypes.h -- Looking for inttypes.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Large File support - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for _aligned_malloc -- Looking for _aligned_malloc - not found -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - found -- Looking for 3 include files stdlib.h, ..., inttypes.h -- Looking for 3 include files stdlib.h, ..., inttypes.h - found -- Looking for 4 include files stdlib.h, ..., sys/ioctl.h -- Looking for 4 include files stdlib.h, ..., sys/ioctl.h - found -- Looking for 5 include files stdlib.h, ..., sys/time.h -- Looking for 5 include files stdlib.h, ..., sys/time.h - found -- Looking for 6 include files stdlib.h, ..., sys/file.h -- Looking for 6 include files stdlib.h, ..., sys/file.h - found -- Looking for 7 include files stdlib.h, ..., sys/socket.h -- Looking for 7 include files stdlib.h, ..., sys/socket.h - found -- Looking for 8 include files stdlib.h, ..., sys/sockio.h -- Looking for 8 include files stdlib.h, ..., sys/sockio.h - not found -- Looking for 8 include files stdlib.h, ..., net/if.h -- Looking for 8 include files stdlib.h, ..., net/if.h - found -- Looking for 9 include files stdlib.h, ..., netinet/in.h -- Looking for 9 include files stdlib.h, ..., netinet/in.h - found -- Looking for 10 include files stdlib.h, ..., net/if_dl.h -- Looking for 10 include files stdlib.h, ..., net/if_dl.h - not found -- Looking for 10 include files stdlib.h, ..., net/if_arp.h -- Looking for 10 include files stdlib.h, ..., net/if_arp.h - found -- Looking for strsignal -- Looking for strsignal - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include files sys/time.h, winsock.h -- Looking for include files sys/time.h, winsock.h - not found -- Looking for include files sys/time.h, byteswap.h -- Looking for include files sys/time.h, byteswap.h - found -- Performing Test GDCM_HAVE_BYTESWAP_H -- Performing Test GDCM_HAVE_BYTESWAP_H - Success -- Looking for rpc.h -- Looking for rpc.h - not found -- Looking for langinfo.h -- Looking for langinfo.h - found -- Looking for nl_langinfo -- Looking for nl_langinfo - found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for strptime -- Looking for strptime - found -- Looking for _stricmp -- Looking for _stricmp - not found -- Looking for _strnicmp -- Looking for _strnicmp - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Performing Test GDCM_CXX_HAS_FUNCTION -- Performing Test GDCM_CXX_HAS_FUNCTION - Success -- Performing Test GDCM_HAVE_WCHAR_IFSTREAM -- Performing Test GDCM_HAVE_WCHAR_IFSTREAM - Failed CMake Deprecation Warning at Modules/ThirdParty/GoogleTest/src/itkgoogletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at Modules/ThirdParty/GoogleTest/src/itkgoogletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Looking for include file sys/file.h -- Looking for include file sys/file.h - found -- Looking for include files sys/file.h, sys/ioctl.h -- Looking for include files sys/file.h, sys/ioctl.h - found -- Looking for 3 include files sys/file.h, ..., sys/resource.h -- Looking for 3 include files sys/file.h, ..., sys/resource.h - found -- Looking for 4 include files sys/file.h, ..., sys/socket.h -- Looking for 4 include files sys/file.h, ..., sys/socket.h - found -- Looking for 5 include files sys/file.h, ..., sys/stat.h -- Looking for 5 include files sys/file.h, ..., sys/stat.h - found -- Looking for 6 include files sys/file.h, ..., sys/time.h -- Looking for 6 include files sys/file.h, ..., sys/time.h - found -- Looking for 7 include files sys/file.h, ..., sys/types.h -- Looking for 7 include files sys/file.h, ..., sys/types.h - found -- Looking for 8 include files sys/file.h, ..., features.h -- Looking for 8 include files sys/file.h, ..., features.h - found -- Looking for 9 include files sys/file.h, ..., dirent.h -- Looking for 9 include files sys/file.h, ..., dirent.h - found -- Looking for 10 include files sys/file.h, ..., setjmp.h -- Looking for 10 include files sys/file.h, ..., setjmp.h - found -- Looking for 11 include files sys/file.h, ..., stddef.h -- Looking for 11 include files sys/file.h, ..., stddef.h - found -- Looking for 12 include files sys/file.h, ..., stdint.h -- Looking for 12 include files sys/file.h, ..., stdint.h - found -- Looking for 13 include files sys/file.h, ..., unistd.h -- Looking for 13 include files sys/file.h, ..., unistd.h - found -- Looking for 14 include files sys/file.h, ..., mach/mach_time.h -- Looking for 14 include files sys/file.h, ..., mach/mach_time.h - not found -- Looking for 14 include files sys/file.h, ..., io.h -- Looking for 14 include files sys/file.h, ..., io.h - not found -- Looking for 14 include files sys/file.h, ..., winsock2.h -- Looking for 14 include files sys/file.h, ..., winsock2.h - not found -- Looking for 14 include files sys/file.h, ..., sys/timeb.h -- Looking for 14 include files sys/file.h, ..., sys/timeb.h - found -- Looking for 15 include files sys/file.h, ..., globus/common.h -- Looking for 15 include files sys/file.h, ..., globus/common.h - not found -- Looking for 15 include files sys/file.h, ..., pdb.h -- Looking for 15 include files sys/file.h, ..., pdb.h - not found -- Looking for 15 include files sys/file.h, ..., pthread.h -- Looking for 15 include files sys/file.h, ..., pthread.h - found -- Looking for 16 include files sys/file.h, ..., srbclient.h -- Looking for 16 include files sys/file.h, ..., srbclient.h - not found -- Looking for 16 include files sys/file.h, ..., string.h -- Looking for 16 include files sys/file.h, ..., string.h - found -- Looking for 17 include files sys/file.h, ..., strings.h -- Looking for 17 include files sys/file.h, ..., strings.h - found -- Looking for 18 include files sys/file.h, ..., stdlib.h -- Looking for 18 include files sys/file.h, ..., stdlib.h - found -- Looking for 19 include files sys/file.h, ..., memory.h -- Looking for 19 include files sys/file.h, ..., memory.h - found -- Looking for 20 include files sys/file.h, ..., dlfcn.h -- Looking for 20 include files sys/file.h, ..., dlfcn.h - found -- Looking for 21 include files sys/file.h, ..., inttypes.h -- Looking for 21 include files sys/file.h, ..., inttypes.h - found -- Looking for 22 include files sys/file.h, ..., netinet/in.h -- Looking for 22 include files sys/file.h, ..., netinet/in.h - found -- Looking for 23 include files sys/file.h, ..., stdbool.h -- Looking for 23 include files sys/file.h, ..., stdbool.h - found -- Looking for include file quadmath.h -- Looking for include file quadmath.h - found -- Looking for ceil in m; -- Looking for ceil in m; - found -- Looking for dlopen in dl;m -- Looking for dlopen in dl;m - found -- Looking for WSAStartup in ws2_32;m;dl -- Looking for WSAStartup in ws2_32;m;dl - not found -- Looking for gethostbyname in wsock32;m;dl -- Looking for gethostbyname in wsock32;m;dl - not found -- Looking for gethostname in ucb;m;dl -- Looking for gethostname in ucb;m;dl - not found -- Performing Other Test STDC_HEADERS - Success -- Performing TEST_LFS_WORKS... yes -- Performing Other Test HAVE_OFF64_T - Success -- Looking for lseek64 -- Looking for lseek64 - found -- Looking for fseeko -- Looking for fseeko - found -- Performing Other Test HAVE_STAT64_STRUCT - Success -- Looking for stat64 -- Looking for stat64 - found -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of unsigned -- Check size of unsigned - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of __int64 -- Check size of __int64 - failed -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of long double -- Check size of long double - done -- Check size of int8_t -- Check size of int8_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of int_least8_t -- Check size of int_least8_t - done -- Check size of uint_least8_t -- Check size of uint_least8_t - done -- Check size of int_fast8_t -- Check size of int_fast8_t - done -- Check size of uint_fast8_t -- Check size of uint_fast8_t - done -- Check size of int16_t -- Check size of int16_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Check size of int_least16_t -- Check size of int_least16_t - done -- Check size of uint_least16_t -- Check size of uint_least16_t - done -- Check size of int_fast16_t -- Check size of int_fast16_t - done -- Check size of uint_fast16_t -- Check size of uint_fast16_t - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of int_least32_t -- Check size of int_least32_t - done -- Check size of uint_least32_t -- Check size of uint_least32_t - done -- Check size of int_fast32_t -- Check size of int_fast32_t - done -- Check size of uint_fast32_t -- Check size of uint_fast32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of int_least64_t -- Check size of int_least64_t - done -- Check size of uint_least64_t -- Check size of uint_least64_t - done -- Check size of int_fast64_t -- Check size of int_fast64_t - done -- Check size of uint_fast64_t -- Check size of uint_fast64_t - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - done -- Check size of ptrdiff_t -- Check size of ptrdiff_t - done -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - done -- Check size of time_t -- Check size of time_t - done -- Check size of _Bool -- Check size of _Bool - done -- Performing Other Test DEV_T_IS_SCALAR - Success -- Looking for CLOCK_MONOTONIC -- Looking for CLOCK_MONOTONIC - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Performing Other Test HAVE_TM_GMTOFF - Success -- Performing Other Test HAVE___TM_GMTOFF - Failed -- Performing Other Test HAVE_STRUCT_TIMEZONE - Success -- Performing Other Test GETTIMEOFDAY_GIVES_TZ - Success -- Performing Other Test TIME_WITH_SYS_TIME - Success -- Performing Other Test HAVE_TM_ZONE - Failed -- Performing Other Test HAVE_STRUCT_TM_TM_ZONE - Failed -- Performing Other Test HAVE_TIMEZONE - Success -- Performing Other Test HAVE_STAT_ST_BLOCKS - Success -- Looking for ioctl -- Looking for ioctl - found -- Performing Other Test HAVE_STRUCT_VIDEOCONFIG - Failed -- Performing Other Test HAVE_STRUCT_TEXT_INFO - Failed -- Looking for _getvideoconfig -- Looking for _getvideoconfig - not found -- Looking for gettextinfo -- Looking for gettextinfo - not found -- Looking for _scrsize -- Looking for _scrsize - not found -- Looking for GetConsoleScreenBufferInfo -- Looking for GetConsoleScreenBufferInfo - not found -- Looking for TIOCGWINSZ -- Looking for TIOCGWINSZ - found -- Looking for TIOCGETD -- Looking for TIOCGETD - found -- Looking for getpwuid -- Looking for getpwuid - found -- Looking for alarm -- Looking for alarm - found -- Looking for fcntl -- Looking for fcntl - found -- Looking for flock -- Looking for flock - found -- Looking for fork -- Looking for fork - found -- Looking for frexpf -- Looking for frexpf - found -- Looking for frexpl -- Looking for frexpl - found -- Looking for gethostname -- Looking for gethostname - found -- Looking for getrusage -- Looking for getrusage - found -- Looking for llround -- Looking for llround - not found -- Looking for llroundf -- Looking for llroundf - not found -- Looking for lround -- Looking for lround - not found -- Looking for lroundf -- Looking for lroundf - not found -- Looking for lstat -- Looking for lstat - found -- Looking for pread -- Looking for pread - found -- Looking for pwrite -- Looking for pwrite - found -- Looking for rand_r -- Looking for rand_r - found -- Looking for random -- Looking for random - found -- Looking for round -- Looking for round - not found -- Looking for roundf -- Looking for roundf - not found -- Looking for setsysinfo -- Looking for setsysinfo - not found -- Looking for signal -- Looking for signal - found -- Looking for longjmp -- Looking for longjmp - found -- Looking for setjmp -- Looking for setjmp - found -- Looking for siglongjmp -- Looking for siglongjmp - found -- Looking for sigsetjmp -- Looking for sigsetjmp - not found -- Looking for sigprocmask -- Looking for sigprocmask - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for srandom -- Looking for srandom - found -- Looking for strdup -- Looking for strdup - found -- Looking for strtoll -- Looking for strtoll - found -- Looking for strtoull -- Looking for strtoull - found -- Looking for symlink -- Looking for symlink - found -- Looking for system -- Looking for system - found -- Looking for tmpfile -- Looking for tmpfile - found -- Looking for asprintf -- Looking for asprintf - found -- Looking for vasprintf -- Looking for vasprintf - found -- Looking for waitpid -- Looking for waitpid - found -- Looking for vsnprintf -- Looking for vsnprintf - found -- Performing Other Test VSNPRINTF_WORKS - Success -- Looking for sigsetjmp -- Looking for sigsetjmp - found -- Performing Other Test HAVE_ATTRIBUTE - Success -- Performing Other Test HAVE_C99_FUNC - Success -- Performing Other Test HAVE_FUNCTION - Success -- Performing Other Test HAVE_C99_DESIGNATED_INITIALIZER - Success -- Performing Other Test SYSTEM_SCOPE_THREADS - Success -- Performing Other Test HAVE_SOCKLEN_T - Success -- Performing Other Test HAVE_INLINE - Success -- Performing Other Test HAVE___INLINE__ - Success -- Performing Other Test HAVE___INLINE - Success -- Checking for appropriate format for 64 bit long: -- Checking for appropriate format for 64 bit long: found "l" -- Looking for difftime -- Looking for difftime - found -- Looking for clock_gettime -- Looking for clock_gettime - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for clock_gettime in posix4 -- Looking for clock_gettime in posix4 - not found -- Performing TEST_DIRECT_VFD_WORKS... no -- Check size of __float128 -- Check size of __float128 - done -- Check size of _Quad -- Check size of _Quad - failed -- Checking IF your system converts long double to (unsigned) long values with special algorithm... no -- Checking IF your system can convert (unsigned) long to long double values with special algorithm... no -- Checking IF correctly converting long double to (unsigned) long long values... yes -- Checking IF correctly converting (unsigned) long long to long double values... yes -- Checking IF the cpu is power9 and cannot correctly converting long double values... no -- Checking IF alignment restrictions are strictly enforced... yes -- Warnings Configuration: -- Filter ZLIB is ON -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Performing CXX Test OLD_HEADER_FILENAME - Failed -- Performing CXX Test HDF_NO_NAMESPACE - Failed -- Performing CXX Test HDF_NO_STD - Failed -- Performing CXX Test BOOL_NOTDEFINED - Failed -- Performing CXX Test NO_STATIC_CAST - Failed -- Performing CXX Test CXX_HAVE_OFFSETOF - Failed -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file limits.h -- Looking for include file limits.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file windows.h -- Looking for include file windows.h - not found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file search.h -- Looking for include file search.h - found -- Looking for floor -- Looking for floor - not found -- Looking for getopt -- Looking for getopt - found -- Looking for isascii -- Looking for isascii - found -- Looking for memmove -- Looking for memmove - found -- Looking for memset -- Looking for memset - found -- Looking for mmap -- Looking for mmap - found -- Looking for pow -- Looking for pow - not found -- Looking for sqrt -- Looking for sqrt - not found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strchr -- Looking for strchr - found -- Looking for strrchr -- Looking for strrchr - found -- Looking for strstr -- Looking for strstr - found -- Looking for strtol -- Looking for strtol - found -- Looking for strtoul -- Looking for strtoul - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian CMake Deprecation Warning at Modules/ThirdParty/MINC/src/libminc/CMakeLists.txt:25 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for rint -- Looking for rint - found -- Looking for copysign -- Looking for copysign - found -- Looking for round -- Looking for round - found -- Looking for srand48 -- Looking for srand48 - found -- Looking for drand48 -- Looking for drand48 - found -- Looking for sleep -- Looking for sleep - found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file sys/select.h -- Looking for include file sys/select.h - found -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Found Python3: /usr/bin/python3.9 (found version "3.9.2") found components: Interpreter Development Development.Module Development.Embed CMake Warning (dev) at /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb/ITKConfig.cmake:151: Syntax Warning in cmake code at column 27 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): Wrapping/ConfigureWrapping.cmake:49 (find_package) Wrapping/CMakeLists.txt:97 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb/ITKConfig.cmake:151: Syntax Warning in cmake code at column 28 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): Wrapping/ConfigureWrapping.cmake:49 (find_package) Wrapping/CMakeLists.txt:97 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb/ITKConfig.cmake:152: Syntax Warning in cmake code at column 33 Argument not separated from preceding token by whitespace. Call Stack (most recent call first): Wrapping/ConfigureWrapping.cmake:49 (find_package) Wrapping/CMakeLists.txt:97 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Error at Wrapping/CMakeUtilityFunctions.cmake:40 (math): math cannot parse the expression: ") set(ITK_WRAP_VECTOR_COMPONENTS + 1": syntax error, unexpected exp_CLOSEPARENT (1). Call Stack (most recent call first): Wrapping/WrapBasicTypes.cmake:55 (INCREMENT) Wrapping/ConfigureWrapping.cmake:131 (include) Wrapping/CMakeLists.txt:97 (include) CMake Warning (dev) at Wrapping/CMakeUtilityFunctions.cmake:40 (math): Unexpected character in expression at position 1: " Call Stack (most recent call first): Wrapping/WrapBasicTypes.cmake:63 (INCREMENT) Wrapping/ConfigureWrapping.cmake:131 (include) Wrapping/CMakeLists.txt:97 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Error at Wrapping/WrapBasicTypes.cmake:73 (message): ITK_WRAP_VECTOR_COMPONENTS must include ITK_WRAP_IMAGE_DIMS Call Stack (most recent call first): Wrapping/ConfigureWrapping.cmake:131 (include) Wrapping/CMakeLists.txt:97 (include) -- Configuring incomplete, errors occurred! See also "/build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb/CMakeFiles/CMakeOutput.log". See also "/build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb/CMakeFiles/CMakeError.log". FAILED: ITKp/src/ITK-stamp/ITK-configure cd /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKb && /usr/bin/cmake -DBUILD_TESTING:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-install -DPY_SITE_PACKAGES_PATH:PATH=/build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-install -DWRAP_ITK_INSTALL_COMPONENT_IDENTIFIER:STRING=PythonWheel -DWRAP_ITK_INSTALL_COMPONENT_PER_MODULE:BOOL=OFF -DITK_LEGACY_SILENT:BOOL=ON -DITK_WRAP_PYTHON:BOOL=ON -DITK_WRAP_unsigned_short:BOOL=ON -DITK_WRAP_double:BOOL=ON -DITK_WRAP_IMAGE_DIMS:STRING=\"2 3 4\" -DITK_WRAP_DOC:BOOL=ON -DDOXYGEN_EXECUTABLE:FILEPATH=/usr/bin/doxygen -DPython3_INCLUDE_DIR:PATH= -DPython3_LIBRARY:FILEPATH= -DPython3_EXECUTABLE:FILEPATH=/usr/bin/python3.9 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_MAKE_PROGRAM:FILEPATH=/usr/bin/ninja -GNinja /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITK && /usr/bin/cmake -E touch /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build/ITKp/src/ITK-stamp/ITK-configure ninja: build stopped: subcommand failed. File "/usr/lib/python3.9/site-packages/skbuild/setuptools_wrap.py", line 589, in setup cmkr.make(make_args, env=env) File "/usr/lib/python3.9/site-packages/skbuild/cmaker.py", line 496, in make raise SKBuildError( -------------------------------------------------------------------------------- -- Trying "Ninja" generator -------------------------------- --------------------------- ---------------------- ----------------- ------------ ------- -- -- ------- ------------ ----------------- ---------------------- --------------------------- -------------------------------- -- Trying "Ninja" generator - success -------------------------------------------------------------------------------- Configuring Project Working directory: /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build Command: cmake /build/python-itk/src/ITKPythonPackage-5.2rc03 -G Ninja -DCMAKE_INSTALL_PREFIX:PATH=/build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-install -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python -DPYTHON_VERSION_STRING:STRING=3.9.2 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.9 -DPYTHON_LIBRARY:FILEPATH=/usr/lib/libpython3.9.so -DSKBUILD:BOOL=TRUE -DCMAKE_MODULE_PATH:PATH=/usr/lib/python3.9/site-packages/skbuild/resources/cmake -DCMAKE_BUILD_TYPE:STRING=Release Traceback (most recent call last): An error occurred while building with CMake. Command: cmake --build . --target install --config Release -- Source directory: /build/python-itk/src/ITKPythonPackage-5.2rc03 Working directory: /build/python-itk/src/ITKPythonPackage-5.2rc03/_skbuild/linux-x86_64-3.9/cmake-build Please see CMake's output for more information. ==> ERROR: A failure occurred in build().  Aborting... ==> ERROR: Build failed, check /var/lib/archbuild/archlinuxcn-x86_64/hubutui/build