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Merge pull request #25 from nceglia/master

removing known types
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Irrationone committed Mar 11, 2019
2 parents d1efb8e + 3a08093 commit 80fbdf8caf24ef3cfc1224a3589514171f03b10c
Showing with 1 addition and 4 deletions.
  1. +1 −4 R/cellassign.R
@@ -149,11 +149,8 @@ cellassign <- function(exprs_obj,
warning("No cell type names supplied - replacing with generics")
colnames(rho) <- paste0("cell_type_", seq_len(ncol(rho)))

if (!is.null(known_types)) {
known_types <- paste0("gene_", known_types)
}
}

# Remove non-expressed genes
val_result <- validate_genes(Y, rho)
Y <- val_result$Y

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