Molecular Evolution Library for Python 2.7 and Python 3.3 (or newer)
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Documents
MEvoLib
Tests
CONTRIB
LICENSE
README
setup.py

README

    README file of MEvoLib
""""""""""""""""""""""""""""""

The MEvoLib is a library of freely available Python tools for molecular
evolution.

The documentation file with further details on how to use our library is
included in the release in "Documents/manual.pdf" and can be downloaded from
our website ( http://zaramit.org/download/documents/MEvoLib_manual.pdf ).

This MEvoLib package is open source software made available under the GNU
General Public License terms. Please see the LICENSE file for further details.

If you use MEvoLib in work contributing to a scientific publication, you can
refer to the latest DOI at:
    https://zenodo.org/badge/latestdoi/20347/JAlvarezJarreta/MEvoLib


> INSTALLATION :
"""""""""""""""""

To build, test and install MEvoLib, download and decompress the source code, go
to the source directory, and type:

    python setup.py build
    python setup.py test
    sudo python setup.py install

If you need to do an additional configuration, e.g. changing the base directory,
type:

    python setup.py


> REQUIREMENTS and DEPENDENCIES :
""""""""""""""""""""""""""""""""""

MEvoLib is currently supported and tested for the following versions of Python:

    - Python 2.7, 3.3 and 3.4  < http://www.python.org >

However, we recommend using Python 2.7, since not all the tools of MEvoLib are
available yet under Python 3.3 or 3.4.

For the full and proper performance of MEvoLib, there are some Python
dependencies to fulfill:

    - NumPy  < http://www.numpy.org >
    - Biopython  < http://www.biopython.org >
    - Dendropy  < http://www.dendropy.org/ >

In addition, many tools require third party tools you should install, such as
Mafft, PhyML or SuperFine. You can install them manually or using the script
provided.


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From the authors and contributors:
    THANK YOU FOR USING MEvoLib!

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