Hacks for working with images and other hacks on Eucalyptus and Amazon clouds
Modified Galaxy interface for the Prok pipelines
Easily launch CloudMan and CloudBioLinux clusters with no manual configuration
The .xml files for the tools presented on the customized Galaxy interface of JCVI's Viral Cloud Resource (VCR). These should replace the default Galaxy .xml before bundling.
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
Genome browsing with JBrowse for JCVI VIGOR output inside Galaxy
GSC Cloud documentation site running on OSQA system on Eucalyptus cloud.
METAREP: JCVI Metagenomics Reports - an open source tool for high-performance comparative metagenomics
A repository that will get you running OSQA on Heroku quickly.
Clone of Enis Afgan's mi-deployment (from bitbucket)
clone of main hg cloudman repository https://bitbucket.org/galaxy/cloudman in order to add eucalyptus functionality
repository for testing my scripts
Build Scripts for creating a CloudVIGOR distribution image(s)
some wild cloud explorations (still learning git so dunno want to mess the teams repo)
JCVI's viral annotation pipeline
Wrapper for curl for operations on S3 and Eucalyptus Walrus (adapted from http://aws.amazon.com/code/128 )