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Commits on Mar 14, 2012
  1. @agbiotec

    added certificated needed for bundling, corrected code that used to b…

    …e under the Amazon case in the bundling
    agbiotec committed Mar 14, 2012
Commits on Mar 8, 2012
  1. repaired _attach() method: euca does not filter get_all_volumes by vo…

    …lume id, and it needs to use volume.attachment_state() instead of volume_state() to get if something is attached
    Alexander Richter committed Mar 8, 2012
Commits on Feb 16, 2012
  1. merged changes to upload from local checkout

    Alexander Richter committed Feb 15, 2012
Commits on Feb 8, 2012
  1. @agbiotec
  2. @agbiotec
Commits on Feb 6, 2012
  1. @agbiotec
Commits on Jan 28, 2012
  1. @agbiotec

    bundling in euca successfully completed - cannot ssh to instance thou…

    …gh. Need boto 1.9b for euca2ools to work
    agbiotec committed Jan 28, 2012
Commits on Jan 27, 2012
  1. @agbiotec
Commits on Jan 26, 2012
  1. @agbiotec
Commits on Jan 24, 2012
  1. @agbiotec
Commits on Jan 19, 2012
  1. @agbiotec
  2. @agbiotec
Commits on Jan 5, 2012
  1. Put() config, etc files from local checkout, rather than wget from bi…

    …tbucket repo
    Alexander Richter committed Jan 5, 2012
Commits on Dec 28, 2011
  1. changed to detect that hostname of eucalyptus s3 (and presumably rack…

    …space) is not bucket-dependent
    Alexander Richter committed Dec 27, 2011
Commits on Dec 27, 2011
  1. @agbiotec
Commits on Dec 20, 2011
  1. @agbiotec

    need euca creadentials as 'aws_key...' - for now in the .boto file, b…

    …ut need to include in the script
    agbiotec committed Dec 20, 2011
  2. @agbiotec

    got up to msg - Rebundling instance with ID 'i-33EC05DA' in region 'e…

    …ucalyptus' - will it rebundle ?
    agbiotec committed Dec 20, 2011
Commits on Dec 18, 2011
  1. @agbiotec

    hacking at will at the fabfile

    agbiotec committed Dec 18, 2011
Commits on Dec 15, 2011
  1. added TODO comments to modify get_ec2_conn() to detect and attach to …

    …euca as well as AWS
    Alexander Richter committed Dec 15, 2011
  2. reraise exception if the s3 connection fails

    Alexander Richter committed Dec 15, 2011
Commits on Dec 12, 2011
  1. modified s3_conn to read from other S3 provider, if "s3_url" key is p…

    …rovided in user data
    Alexander Richter committed Dec 12, 2011
  2. Added code to add the hostname to /etc/hosts. Need to update to use c…

    …loud-init to maintain it, since the hostname will change in child images
    Alexander Richter committed Dec 12, 2011
Commits on Nov 24, 2011
  1. @afgane
  2. @afgane

    Add cmake package for freebayes

    afgane committed Nov 24, 2011
Commits on Nov 3, 2011
  1. @afgane
Commits on Oct 7, 2011
  1. @afgane

    Updates to the machine image configuration code so it can be run over…

    … an image that has many of the configuration components already configured
    afgane committed Oct 7, 2011
Commits on Oct 6, 2011
  1. @afgane
Commits on Sep 29, 2011
  1. @afgane

    Merge

    afgane committed Sep 29, 2011
  2. @afgane

    Added option to install CloudMan-required components only without for…

    …cing all of Galaxy dependencies as well - see invocation options for details
    afgane committed Sep 29, 2011
Commits on Aug 3, 2011
  1. @afgane
Commits on Jun 29, 2011
  1. @afgane

    Added FastQC install procedure, updated Picard & GATK versions, made …

    …those tools actually visible within Galaxy by creating sym links
    afgane committed Jun 29, 2011
Commits on Jun 22, 2011
  1. @afgane
Commits on Jun 21, 2011
  1. @afgane

    Ensure Galaxy is started and stopped before creating a snapshot to en…

    …sure updated eggs get downloaded. Also, added a bunch of prints indicating of what's happening in the process.
    afgane committed Jun 21, 2011
Commits on Jun 8, 2011
  1. @afgane
  2. @afgane

    Updated mi_fabfile.py and tools_fabfile.py to be compatible with Fabr…

    …ic 1.0*; Fabric 0.9* is no longer supported.
    afgane committed Jun 8, 2011
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