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Pinned repositories

  1. BisPin

    BisPin is a Python 2.7 program that uses BFAST to map bisulfite-treated short DNA reads to a reference genome. It supports the hairpin construction strategy and rescores ambiguously mapped reads. I…

    Python

  2. FastNeighborNet

    Fast implementations of the Neighbor Net phylogenetic split network method.

    Java 2

  3. InfoTrim

    A DNA read quality trimmer using entropy created with Python

    Python

  4. BFAST-Gap

    BFAST-Gap is a modification of the BFAST short DNA read trimmer. BFAST-Gap adds functionality for Ion Torrent DNA reads.

    C

29 contributions in the last year

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Contribution activity

November 2018

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