@JaneliaSciComp

Howard Hughes Medical Institute

GitHub organization maintained by Scientific Computing at HHMI's Janelia Research Campus for use by HHMI staff and external collaborators.

  • PyWaveSurfer is a Python package for reading WaveSurfer data files in Python.

    Python 2 1 Updated Sep 23, 2018
  • Interface to configure pipeline jobs for LightSheet

    JavaScript 1 MIT Updated Sep 21, 2018
  • JRCLUST

    Matlab 18 9 Updated Sep 21, 2018
  • Python MIT Updated Sep 20, 2018
  • Java API to LSF

    Java 1 MIT Updated Sep 19, 2018
  • Python 1 GPL-3.0 Updated Sep 18, 2018
  • A Matlab application for electrophysiology data analysis

    C++ 6 7 Updated Sep 14, 2018
  • various binaries and forks needed for reiser lab fly experiment work

    C++ Updated Sep 13, 2018
  • H5J Reader Plugin for Fiji project.

    Java 1 Updated Sep 12, 2018
  • C++ 10 Updated Sep 11, 2018
  • scripts for using spark on janelia's cluster

    Python 3 15 Updated Sep 7, 2018
  • Lua script for Nginx that performs reverse proxy auth using JWT's

    JavaScript 1 98 MIT Updated Aug 10, 2018
  • Lightweight node.js based web service that provides user authentication against LDAP server (Active Directory / Windows network) credentials and returns a JSON Web Token.

    HTML 1 11 Updated Aug 7, 2018
  • C++ 21 Updated Jul 25, 2018
  • ColorMIP_Mask_Search plugin for Fiji

    Java 1 2 Updated Jul 2, 2018
  • Media browsing, analysis and annotation

    Matlab 1 Updated Jun 8, 2018
  • convert between Z-order, Cartesian, and quadtree/octree coordinates

    Julia 2 1 Updated May 29, 2018
  • VR System Released with eLife 2017 publication: "Experience-dependent shaping of hippocampal CA1 intracellular activity in novel and familiar environments”

    C++ 1 AGPL-3.0 Updated May 21, 2018
  • Wrapper around isomorphic-fetch to add custom headers to each request

    JavaScript MIT Updated May 7, 2018
  • Django SAML2 Authentication Made Easy. Easily integrate with SAML2 SSO identity providers like Okta

    Python 54 Updated Feb 9, 2018
  • A Matlab application for browsing and analysis of electrophysiology data.

    Matlab 1 Updated Jan 26, 2018
  • National Instruments Data Acquisition Interface

    Julia 9 6 Updated Jan 12, 2018
  • Segmentation of TEM images of a fly brain

    Python Updated Nov 13, 2017
  • pyktx

    Forked from cmbruns/pyktx

    Python module for using KTX format OpenGL texture image files

    Python 1 1 MIT Updated Oct 18, 2017
  • JavaScript 2 5 Updated Sep 26, 2017
  • Java Updated Sep 23, 2017
  • A repository for official apiman plugins.

    Java 34 Apache-2.0 Updated Apr 25, 2017
  • apiman

    Forked from apiman/apiman

    API Management

    Java 213 Apache-2.0 Updated Apr 24, 2017
  • Scripts to use Blender for physical simulations in python

    Python Updated Apr 13, 2017
  • Introduction to Python Programming @ Janelia Research Campus

    Jupyter Notebook 1 6 Updated Apr 12, 2017