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  1. miaaim-python miaaim-python Public

    MIAAIM: Multi-omics Image Alignment and Analysis by Information Manifolds

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  2. hdi-prep hdi-prep Public

    High-dimensional image preparation module for MIAAIM

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  3. miaaim miaaim Public

    Multi-omics image alignment and analysis by information manifolds (MIAAIM)

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  4. hdi-reg hdi-reg Public

    High-dimensional image registration workflow as part of the MIAAIM framework. Hdi-reg is written in Python, and utilizes the Elastix library for computations.

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  5. mcmicro-ilastik mcmicro-ilastik Public

    Forked from labsyspharm/mcmicro-ilastik

    Ilastik segmentation module for mcmicro

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  6. hdi-utils hdi-utils Public

    General importing and utility functions for high-dimensional image data

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