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PacBio_barcode_assocation

  1. Pacbio1b.pl – checks the lowest quality score and outputs in file called sum1.out #usage: script.pl infile outfile qavgcut\n

  2. Pacbio2b.pl – checks for unique restriction sites and puts all sequences with these into output file in direction from gene to barcode. #usage: script.pl infile outfile

  3. Pacbio3b.pl – checks how many mutations are in library gene and for illumina primer binding site. If primer site and less than four mutations it is output. #usage: script.pl infile outfile

  4. Pacbio4b.pl - #usage: script.pl infile outfile

  5. Pacbio5b.pl #usage: script.pl infile outfile

  6. Pacbio6b.pl #usage: script.pl infile outfile

  7. Pacbio7b.pl #usage: script.pl infile outfile

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