Dependency analyzer seems to skip packages that are import .PKGNAME #933
Description
I think I am running into troubles with create_app whenever a dependency puts import .PKGNAME or using .PKGNAME statements in one of their package sub-files, for example:
- Example from JLD2.jl has
using .UnPackon top - Example from HDF5.jl has
import .FileIOon top
This seems to cause the following warning in the final app:
┌ Warning: Error requiring `UnPack` from `JLD2`
│ exception =
│ IOError: stat("/home/users/kilian/.julia/packages/JLD2/ryhNR/ext/UnPackExt.jl"): permission denied (EACCES)
│ Stacktrace:
│ [1] uv_error
│ @ Base ./libuv.jl:100 [inlined]
│ [2] stat(path::String)
│ @ Base.Filesystem ./stat.jl:152
│ [3] isfile(path::String)
│ @ Base.Filesystem ./stat.jl:461
│ [4] macro expansion
│ @ /home/users/kilian/.julia/packages/Requires/Z8rfN/src/Requires.jl:37 [inlined]
│ [5] top-level scope
│ @ /home/users/kilian/.julia/packages/JLD2/ryhNR/src/JLD2.jl:607
│ [6] eval
│ @ Core ./boot.jl:385 [inlined]
│ [7] eval
│ @ JLD2 /home/users/kilian/.julia/packages/JLD2/ryhNR/src/JLD2.jl:1 [inlined]
│ [8] (::JLD2.var"#131#134")()
│ @ JLD2 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:101
│ [9] macro expansion
│ @ Requires ./timing.jl:395 [inlined]
│ [10] err(f::Any, listener::Module, modname::String, file::String, line::Any)
│ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:47
│ [11] (::JLD2.var"#130#133")()
│ @ JLD2 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:100
│ [12] withpath(f::Any, path::String)
│ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:37
│ [13] (::JLD2.var"#129#132")()
│ @ JLD2 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:99
│ [14] listenpkg(f::Any, pkg::Base.PkgId)
│ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:20
│ [15] macro expansion
│ @ JLD2 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:98 [inlined]
│ [16] __init__()
│ @ JLD2 /home/users/kilian/.julia/packages/JLD2/ryhNR/src/JLD2.jl:606
└ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:51
┌ Warning: Error requiring `FileIO` from `HDF5`
│ exception =
│ IOError: stat("/home/users/kilian/.julia/packages/HDF5/HtnQZ/src/fileio.jl"): permission denied (EACCES)
│ Stacktrace:
│ [1] uv_error
│ @ Base ./libuv.jl:100 [inlined]
│ [2] stat(path::String)
│ @ Base.Filesystem ./stat.jl:152
│ [3] isfile(path::String)
│ @ Base.Filesystem ./stat.jl:461
│ [4] top-level scope
│ @ /home/users/kilian/.julia/packages/Requires/Z8rfN/src/Requires.jl:37
│ [5] eval
│ @ Core ./boot.jl:385 [inlined]
│ [6] eval
│ @ HDF5 /home/users/kilian/.julia/packages/HDF5/HtnQZ/src/HDF5.jl:1 [inlined]
│ [7] (::HDF5.var"#115#121")()
│ @ HDF5 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:101
│ [8] macro expansion
│ @ Requires ./timing.jl:395 [inlined]
│ [9] err(f::Any, listener::Module, modname::String, file::String, line::Any)
│ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:47
│ [10] (::HDF5.var"#114#120")()
│ @ HDF5 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:100
│ [11] withpath(f::Any, path::String)
│ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:37
│ [12] (::HDF5.var"#113#119")()
│ @ HDF5 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:99
│ [13] listenpkg(f::Any, pkg::Base.PkgId)
│ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:20
│ [14] macro expansion
│ @ HDF5 /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:98 [inlined]
│ [15] __init__()
│ @ HDF5 /home/users/kilian/.julia/packages/HDF5/HtnQZ/src/HDF5.jl:119
└ @ Requires /home/users/kilian/.julia/packages/Requires/Z8rfN/src/require.jl:51Is there any way to get around this?