Cannot add Arpack - tree hash mismatch

[Balinus]

Hello, tried to add Arpack and got the following error.

(v1.3) pkg> add Arpack
 Resolving package versions...
┌ Info: Replacing symlinks in tarball by their source files ...
│ "./lib/libopenblas64_.a" => "./lib/libopenblas64_.0.3.7.a"
│ "./lib/libopenblas64_.so" => "./lib/libopenblas64_.0.3.7.so"
└ "./lib/libopenblas64_.so.0" => "./lib/libopenblas64_.0.3.7.so"
┌ Error: Tree Hash Mismatch!
│   Expected git-tree-sha1:   568267dd4b74c36ec30153eb59e3445f353babea
│   Calculated git-tree-sha1: 86b950051274abe7ab169bb1cc0d1e0c8c2b2175
└ @ Pkg.Artifacts /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:779
ERROR: Unable to automatically install 'OpenBLAS' from '/gpfs/home/dl2594/.julia/packages/OpenBLAS_jll/yFKcJ/Artifacts.toml'
Stacktrace:
 [1] error(::String) at ./error.jl:33
 [2] #ensure_artifact_installed#42(::Pkg.BinaryPlatforms.Platform, ::Bool, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:873
 [3] (::Pkg.Artifacts.var"#kw##ensure_artifact_installed")(::NamedTuple{(:platform, :verbose),Tuple{Pkg.BinaryPlatforms.Linux,Bool}}, ::typeof(Pkg.Artifacts.ensure_artifact_installed), ::String, ::Dict{String,Any}, ::String) at ./none:0
 [4] #ensure_all_artifacts_installed#43(::Pkg.BinaryPlatforms.Platform, ::Nothing, ::Bool, ::Bool, ::typeof(Pkg.Artifacts.ensure_all_artifacts_installed), ::String) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Artifacts.jl:919
 [5] #ensure_all_artifacts_installed at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:0 [inlined]
 [6] #download_artifacts#78(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{String,1}) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:580
 [7] #download_artifacts at ./none:0 [inlined]
 [8] #download_artifacts#73(::Pkg.BinaryPlatforms.Linux, ::Bool, ::typeof(Pkg.Operations.download_artifacts), ::Array{Pkg.Types.PackageSpec,1}) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:570
 [9] #download_artifacts at ./none:0 [inlined]
 [10] #add#112(::Bool, ::Pkg.BinaryPlatforms.Linux, ::typeof(Pkg.Operations.add), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}, ::Array{Base.UUID,1}) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/Operations.jl:1017
 [11] #add at ./none:0 [inlined]
 [12] #add#25(::Bool, ::Pkg.BinaryPlatforms.Linux, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Pkg.API.add), ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:102
 [13] add(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/API.jl:72
 [14] do_add!(::Dict{Symbol,Any}, ::Array{Pkg.Types.PackageSpec,1}, ::Dict{Symbol,Any}) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:505
 [15] #invokelatest#1(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(Base.invokelatest), ::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:709
 [16] invokelatest(::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:708
 [17] do_cmd!(::Pkg.REPLMode.Command, ::REPL.LineEditREPL) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:412
 [18] #do_cmd#23(::Bool, ::typeof(Pkg.REPLMode.do_cmd), ::REPL.LineEditREPL, ::String) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:391
 [19] do_cmd at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:387 [inlined]
 [20] (::Pkg.REPLMode.var"#28#31"{REPL.LineEditREPL,REPL.LineEdit.Prompt})(::REPL.LineEdit.MIState, ::Base.GenericIOBuffer{Array{UInt8,1}}, ::Bool) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/Pkg/src/REPLMode.jl:619
 [21] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [22] invokelatest at ./essentials.jl:708 [inlined]
 [23] run_interface(::REPL.Terminals.TextTerminal, ::REPL.LineEdit.ModalInterface, ::REPL.LineEdit.MIState) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/REPL/src/LineEdit.jl:2306
 [24] run_frontend(::REPL.LineEditREPL, ::REPL.REPLBackendRef) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:1045
 [25] run_repl(::REPL.AbstractREPL, ::Any) at /tmp/julia-1.3.1/usr/share/julia/stdlib/v1.3/REPL/src/REPL.jl:201
 [26] (::Base.var"#770#772"{Bool,Bool,Bool,Bool})(::Module) at ./client.jl:382
 [27] #invokelatest#1 at ./essentials.jl:709 [inlined]
 [28] invokelatest at ./essentials.jl:708 [inlined]
 [29] run_main_repl(::Bool, ::Bool, ::Bool, ::Bool, ::Bool) at ./client.jl:366
 [30] exec_options(::Base.JLOptions) at ./client.jl:304
 [31] _start() at ./client.jl:460

Julia version detail. Julia is installed system-wide on a cluster.

julia> versioninfo()
Julia Version 1.3.1
Commit 2d5741174c (2019-12-30 21:36 UTC)
Platform Info:
  OS: Linux (x86_64-redhat-linux)
  CPU: Intel(R) Xeon(R) Gold 6150 CPU @ 2.70GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.1 (ORCJIT, skylake)
Environment:
  JULIA_NUM_THREADS = 16

Any info would be appreciated!

[andreasnoack]

Is the Julia binary downloaded from julialang.org?

[Balinus]

The system admin tells me that it was built from source. He's investigating.... will update the thread when we find something!

[andreasnoack]

You might be able to find some useful information in #5

[fredrikekre]

@staticfloat ^

[staticfloat]

@Balinus do you have BINARYPROVIDER_COPYDEREF defined in your environment? If not, are you unable to create symlinks in your /tmp directory?

[Balinus]

Nice catch! I did have BINARYPROVIDER_COPYDEREF set to true in my environment. Can't remember why I set it to true.

Removed that setting and the installation worked. Thanks!