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GE PanelApp integration #6

merged 3 commits into from Apr 10, 2018


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VelNZ commented Mar 28, 2018

Added the Genomics England PanelApp panels to the Seave database here: KCCG/seave-databases-annotations@c1bc5b0

This pull request adds an annotation column to all variants with whether they are in one or more of these panels and the level of evidence if so. The query pages for short variants and the GBS now have dropdowns that allow selecting one of these panels for query. The user can select just the High Evidence version or a HighModerateEvidence version for each panel.

VelNZ added some commits Mar 26, 2018

Adding capability to fetch PanelApp panel names and the number of gen…
…es for each confidence level from the DB. Displaying this as a filter option on the short variant and GBS query pages.

@VelNZ VelNZ requested a review from drmjc Mar 28, 2018


drmjc approved these changes Apr 10, 2018

@drmjc drmjc merged commit 2324e70 into master Apr 10, 2018

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@drmjc drmjc deleted the ge-panelapp-integration branch Apr 10, 2018

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