diff --git a/Pipfile b/Pipfile
index 64e2eaf..67e3831 100644
--- a/Pipfile
+++ b/Pipfile
@@ -3,16 +3,6 @@ url = "https://pypi.python.org/simple"
 verify_ssl = true
 name = "pypi"
 
-[packages]
-cement = ">= 3.0.4"
-flask_cors = "*"
-flask_profiler = "*"
-gunicorn = "*"
-openapi_resolver = "*"
-openapi_spec_validator = "*"
-setuptools = "*"
-pytest = "*"
-
 [dev-packages]
 capturer = "*"
 flask = ">= 1.1.0"
@@ -31,5 +21,13 @@ editable = true
 [packages.connexion]
 extras = [ "swagger-ui",]
 
-[packages.swagger_ui_bundle]
-git = "https://github.com/KarrLab/datanator_swagger_ui_bundle.git"
+[packages]
+swagger_ui_bundle = {git = "https://github.com/KarrLab/datanator_swagger_ui_bundle.git"}
+cement = ">= 3.0.4"
+flask_cors = "*"
+flask_profiler = "*"
+gunicorn = "*"
+openapi_resolver = "*"
+openapi_spec_validator = "*"
+setuptools = "*"
+pytest = "*"
\ No newline at end of file
diff --git a/Pipfile.lock b/Pipfile.lock
new file mode 100644
index 0000000..5da996d
--- /dev/null
+++ b/Pipfile.lock
@@ -0,0 +1,541 @@
+{
+    "_meta": {
+        "hash": {
+            "sha256": "76aae16b9f8ebd77a8e81221c00f56c6079e19d08327689bacc3d8085c75ab83"
+        },
+        "pipfile-spec": 6,
+        "requires": {},
+        "sources": [
+            {
+                "name": "pypi",
+                "url": "https://pypi.python.org/simple",
+                "verify_ssl": true
+            }
+        ]
+    },
+    "default": {
+        "attrs": {
+            "hashes": [
+                "sha256:08a96c641c3a74e44eb59afb61a24f2cb9f4d7188748e76ba4bb5edfa3cb7d1c",
+                "sha256:f7b7ce16570fe9965acd6d30101a28f62fb4a7f9e926b3bbc9b61f8b04247e72"
+            ],
+            "version": "==19.3.0"
+        },
+        "cement": {
+            "hashes": [
+                "sha256:10a8459dc9fc31d6c038ede24a9081c5c3bd5fcd75b071e01baf281f81c9eace",
+                "sha256:3b6b550d56d8a893fc4e4c1d153c5322ab2aa991e85f3358890af63bafafa3f4"
+            ],
+            "index": "pypi",
+            "version": "==3.0.4"
+        },
+        "click": {
+            "hashes": [
+                "sha256:8a18b4ea89d8820c5d0c7da8a64b2c324b4dabb695804dbfea19b9be9d88c0cc",
+                "sha256:e345d143d80bf5ee7534056164e5e112ea5e22716bbb1ce727941f4c8b471b9a"
+            ],
+            "version": "==7.1.1"
+        },
+        "connexion": {
+            "extras": [
+                "swagger-ui"
+            ]
+        },
+        "datanator-query-python": {
+            "editable": true,
+            "git": "https://github.com/KarrLab/datanator_query_python.git"
+        },
+        "flask": {
+            "hashes": [
+                "sha256:13f9f196f330c7c2c5d7a5cf91af894110ca0215ac051b5844701f2bfd934d52",
+                "sha256:45eb5a6fd193d6cf7e0cf5d8a5b31f83d5faae0293695626f539a823e93b13f6"
+            ],
+            "version": "==1.1.1"
+        },
+        "flask-cors": {
+            "hashes": [
+                "sha256:72170423eb4612f0847318afff8c247b38bd516b7737adfc10d1c2cdbb382d16",
+                "sha256:f4d97201660e6bbcff2d89d082b5b6d31abee04b1b3003ee073a6fd25ad1d69a"
+            ],
+            "index": "pypi",
+            "version": "==3.0.8"
+        },
+        "flask-httpauth": {
+            "hashes": [
+                "sha256:0149953720489407e51ec24bc2f86273597b7973d71cd51f9443bd0e2a89bd72",
+                "sha256:6ef8b761332e780f9ff74d5f9056c2616f52babc1998b01d9f361a1e439e61b9"
+            ],
+            "version": "==3.3.0"
+        },
+        "flask-profiler": {
+            "hashes": [
+                "sha256:56b51e47c98e9f36150fafffd449b075c58a9b404389a071d405222a35183758",
+                "sha256:fc9f2875a4f22223ddc04ffacd75792854162c4cdbef165598a51f898521ac51"
+            ],
+            "index": "pypi",
+            "version": "==1.8.1"
+        },
+        "gunicorn": {
+            "hashes": [
+                "sha256:1904bb2b8a43658807108d59c3f3d56c2b6121a701161de0ddf9ad140073c626",
+                "sha256:cd4a810dd51bf497552cf3f863b575dabd73d6ad6a91075b65936b151cbf4f9c"
+            ],
+            "index": "pypi",
+            "version": "==20.0.4"
+        },
+        "importlib-metadata": {
+            "hashes": [
+                "sha256:298a914c82144c6b3b06c568a8973b89ad2176685f43cd1ea9ba968307300fa9",
+                "sha256:dfc83688553a91a786c6c91eeb5f3b1d31f24d71877bbd94ecbf5484e57690a2"
+            ],
+            "markers": "python_version < '3.8'",
+            "version": "==1.5.2"
+        },
+        "itsdangerous": {
+            "hashes": [
+                "sha256:321b033d07f2a4136d3ec762eac9f16a10ccd60f53c0c91af90217ace7ba1f19",
+                "sha256:b12271b2047cb23eeb98c8b5622e2e5c5e9abd9784a153e9d8ef9cb4dd09d749"
+            ],
+            "version": "==1.1.0"
+        },
+        "jinja2": {
+            "hashes": [
+                "sha256:93187ffbc7808079673ef52771baa950426fd664d3aad1d0fa3e95644360e250",
+                "sha256:b0eaf100007721b5c16c1fc1eecb87409464edc10469ddc9a22a27a99123be49"
+            ],
+            "version": "==2.11.1"
+        },
+        "jsonschema": {
+            "hashes": [
+                "sha256:4e5b3cf8216f577bee9ce139cbe72eca3ea4f292ec60928ff24758ce626cd163",
+                "sha256:c8a85b28d377cc7737e46e2d9f2b4f44ee3c0e1deac6bf46ddefc7187d30797a"
+            ],
+            "version": "==3.2.0"
+        },
+        "markupsafe": {
+            "hashes": [
+                "sha256:00bc623926325b26bb9605ae9eae8a215691f33cae5df11ca5424f06f2d1f473",
+                "sha256:09027a7803a62ca78792ad89403b1b7a73a01c8cb65909cd876f7fcebd79b161",
+                "sha256:09c4b7f37d6c648cb13f9230d847adf22f8171b1ccc4d5682398e77f40309235",
+                "sha256:1027c282dad077d0bae18be6794e6b6b8c91d58ed8a8d89a89d59693b9131db5",
+                "sha256:13d3144e1e340870b25e7b10b98d779608c02016d5184cfb9927a9f10c689f42",
+                "sha256:24982cc2533820871eba85ba648cd53d8623687ff11cbb805be4ff7b4c971aff",
+                "sha256:29872e92839765e546828bb7754a68c418d927cd064fd4708fab9fe9c8bb116b",
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+                "sha256:46c99d2de99945ec5cb54f23c8cd5689f6d7177305ebff350a58ce5f8de1669e",
+                "sha256:500d4957e52ddc3351cabf489e79c91c17f6e0899158447047588650b5e69183",
+                "sha256:535f6fc4d397c1563d08b88e485c3496cf5784e927af890fb3c3aac7f933ec66",
+                "sha256:596510de112c685489095da617b5bcbbac7dd6384aeebeda4df6025d0256a81b",
+                "sha256:62fe6c95e3ec8a7fad637b7f3d372c15ec1caa01ab47926cfdf7a75b40e0eac1",
+                "sha256:6788b695d50a51edb699cb55e35487e430fa21f1ed838122d722e0ff0ac5ba15",
+                "sha256:6dd73240d2af64df90aa7c4e7481e23825ea70af4b4922f8ede5b9e35f78a3b1",
+                "sha256:717ba8fe3ae9cc0006d7c451f0bb265ee07739daf76355d06366154ee68d221e",
+                "sha256:79855e1c5b8da654cf486b830bd42c06e8780cea587384cf6545b7d9ac013a0b",
+                "sha256:7c1699dfe0cf8ff607dbdcc1e9b9af1755371f92a68f706051cc8c37d447c905",
+                "sha256:88e5fcfb52ee7b911e8bb6d6aa2fd21fbecc674eadd44118a9cc3863f938e735",
+                "sha256:8defac2f2ccd6805ebf65f5eeb132adcf2ab57aa11fdf4c0dd5169a004710e7d",
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+                "sha256:9add70b36c5666a2ed02b43b335fe19002ee5235efd4b8a89bfcf9005bebac0d",
+                "sha256:9bf40443012702a1d2070043cb6291650a0841ece432556f784f004937f0f32c",
+                "sha256:ade5e387d2ad0d7ebf59146cc00c8044acbd863725f887353a10df825fc8ae21",
+                "sha256:b00c1de48212e4cc9603895652c5c410df699856a2853135b3967591e4beebc2",
+                "sha256:b1282f8c00509d99fef04d8ba936b156d419be841854fe901d8ae224c59f0be5",
+                "sha256:b2051432115498d3562c084a49bba65d97cf251f5a331c64a12ee7e04dacc51b",
+                "sha256:ba59edeaa2fc6114428f1637ffff42da1e311e29382d81b339c1817d37ec93c6",
+                "sha256:c8716a48d94b06bb3b2524c2b77e055fb313aeb4ea620c8dd03a105574ba704f",
+                "sha256:cd5df75523866410809ca100dc9681e301e3c27567cf498077e8551b6d20e42f",
+                "sha256:cdb132fc825c38e1aeec2c8aa9338310d29d337bebbd7baa06889d09a60a1fa2",
+                "sha256:e249096428b3ae81b08327a63a485ad0878de3fb939049038579ac0ef61e17e7",
+                "sha256:e8313f01ba26fbbe36c7be1966a7b7424942f670f38e666995b88d012765b9be"
+            ],
+            "version": "==1.1.1"
+        },
+        "more-itertools": {
+            "hashes": [
+                "sha256:5dd8bcf33e5f9513ffa06d5ad33d78f31e1931ac9a18f33d37e77a180d393a7c",
+                "sha256:b1ddb932186d8a6ac451e1d95844b382f55e12686d51ca0c68b6f61f2ab7a507"
+            ],
+            "version": "==8.2.0"
+        },
+        "openapi-resolver": {
+            "hashes": [
+                "sha256:2cb47e606967dfa7686f269f34037f548acf39c64f3f8592eaafe5f01dae6dca"
+            ],
+            "index": "pypi",
+            "version": "==0.0.6"
+        },
+        "openapi-spec-validator": {
+            "hashes": [
+                "sha256:0caacd9829e9e3051e830165367bf58d436d9487b29a09220fa7edb9f47ff81b",
+                "sha256:d4da8aef72bf5be40cf0df444abd20009a41baf9048a8e03750c07a934f1bdd8",
+                "sha256:e489c7a273284bc78277ac22791482e8058d323b4a265015e9fcddf6a8045bcd"
+            ],
+            "index": "pypi",
+            "version": "==0.2.8"
+        },
+        "packaging": {
+            "hashes": [
+                "sha256:3c292b474fda1671ec57d46d739d072bfd495a4f51ad01a055121d81e952b7a3",
+                "sha256:82f77b9bee21c1bafbf35a84905d604d5d1223801d639cf3ed140bd651c08752"
+            ],
+            "version": "==20.3"
+        },
+        "pathlib": {
+            "hashes": [
+                "sha256:6940718dfc3eff4258203ad5021090933e5c04707d5ca8cc9e73c94a7894ea9f"
+            ],
+            "version": "==1.0.1"
+        },
+        "pkg-utils": {
+            "editable": true,
+            "git": "https://github.com/KarrLab/pkg_utils.git"
+        },
+        "pluggy": {
+            "hashes": [
+                "sha256:15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0",
+                "sha256:966c145cd83c96502c3c3868f50408687b38434af77734af1e9ca461a4081d2d"
+            ],
+            "version": "==0.13.1"
+        },
+        "py": {
+            "hashes": [
+                "sha256:5e27081401262157467ad6e7f851b7aa402c5852dbcb3dae06768434de5752aa",
+                "sha256:c20fdd83a5dbc0af9efd622bee9a5564e278f6380fffcacc43ba6f43db2813b0"
+            ],
+            "version": "==1.8.1"
+        },
+        "pyparsing": {
+            "hashes": [
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+                "sha256:c342dccb5250c08d45fd6f8b4a559613ca603b57498511740e65cd11a2e7dcec"
+            ],
+            "version": "==2.4.6"
+        },
+        "pyrsistent": {
+            "hashes": [
+                "sha256:28669905fe725965daa16184933676547c5bb40a5153055a8dee2a4bd7933ad3"
+            ],
+            "version": "==0.16.0"
+        },
+        "pytest": {
+            "hashes": [
+                "sha256:0e5b30f5cb04e887b91b1ee519fa3d89049595f428c1db76e73bd7f17b09b172",
+                "sha256:84dde37075b8805f3d1f392cc47e38a0e59518fb46a431cfdaf7cf1ce805f970"
+            ],
+            "index": "pypi",
+            "version": "==5.4.1"
+        },
+        "pyyaml": {
+            "hashes": [
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+                "sha256:cc8955cfbfc7a115fa81d85284ee61147059a753344bc51098f3ccd69b0d7e0c",
+                "sha256:d13155f591e6fcc1ec3b30685d50bf0711574e2c0dfffd7644babf8b5102ca1a"
+            ],
+            "version": "==5.3.1"
+        },
+        "simplejson": {
+            "hashes": [
+                "sha256:0fe3994207485efb63d8f10a833ff31236ed27e3b23dadd0bf51c9900313f8f2",
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+                "sha256:4cf91aab51b02b3327c9d51897960c554f00891f9b31abd8a2f50fd4a0071ce8",
+                "sha256:7cce4bac7e0d66f3a080b80212c2238e063211fe327f98d764c6acbc214497fc",
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+                "sha256:86afc5b5cbd42d706efd33f280fec7bd7e2772ef54e3f34cf6b30777cd19a614",
+                "sha256:87d349517b572964350cc1adc5a31b493bbcee284505e81637d0174b2758ba17",
+                "sha256:926bcbef9eb60e798eabda9cd0bbcb0fca70d2779aa0aa56845749d973eb7ad5",
+                "sha256:9a126c3a91df5b1403e965ba63b304a50b53d8efc908a8c71545ed72535374a3",
+                "sha256:daaf4d11db982791be74b23ff4729af2c7da79316de0bebf880fa2d60bcc8c5a",
+                "sha256:fc046afda0ed8f5295212068266c92991ab1f4a50c6a7144b69364bdee4a0159",
+                "sha256:fc9051d249dd5512e541f20330a74592f7a65b2d62e18122ca89bf71f94db748"
+            ],
+            "version": "==3.17.0"
+        },
+        "six": {
+            "hashes": [
+                "sha256:236bdbdce46e6e6a3d61a337c0f8b763ca1e8717c03b369e87a7ec7ce1319c0a",
+                "sha256:8f3cd2e254d8f793e7f3d6d9df77b92252b52637291d0f0da013c76ea2724b6c"
+            ],
+            "version": "==1.14.0"
+        },
+        "swagger-ui-bundle": {
+            "git": "https://github.com/KarrLab/datanator_swagger_ui_bundle.git",
+            "ref": "7f9f8d998718663be1eddbfe1ab5a736c032a0bd"
+        },
+        "wcwidth": {
+            "hashes": [
+                "sha256:cafe2186b3c009a04067022ce1dcd79cb38d8d65ee4f4791b8888d6599d1bbe1",
+                "sha256:ee73862862a156bf77ff92b09034fc4825dd3af9cf81bc5b360668d425f3c5f1"
+            ],
+            "version": "==0.1.9"
+        },
+        "werkzeug": {
+            "hashes": [
+                "sha256:169ba8a33788476292d04186ab33b01d6add475033dfc07215e6d219cc077096",
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+            "version": "==1.0.0"
+        },
+        "zipp": {
+            "hashes": [
+                "sha256:aa36550ff0c0b7ef7fa639055d797116ee891440eac1a56f378e2d3179e0320b",
+                "sha256:c599e4d75c98f6798c509911d08a22e6c021d074469042177c8c86fb92eefd96"
+            ],
+            "version": "==3.1.0"
+        }
+    },
+    "develop": {
+        "attrs": {
+            "hashes": [
+                "sha256:08a96c641c3a74e44eb59afb61a24f2cb9f4d7188748e76ba4bb5edfa3cb7d1c",
+                "sha256:f7b7ce16570fe9965acd6d30101a28f62fb4a7f9e926b3bbc9b61f8b04247e72"
+            ],
+            "version": "==19.3.0"
+        },
+        "capturer": {
+            "hashes": [
+                "sha256:4849032f6a670c02be434c484a0abf43c870a1efafafbfffd2e6f1c1f7ef5001",
+                "sha256:b1ef6e8831cd170906df7c881a36c8b8a1b0b824b147b950a1a8c11776da981b"
+            ],
+            "index": "pypi",
+            "version": "==3.0"
+        },
+        "certifi": {
+            "hashes": [
+                "sha256:017c25db2a153ce562900032d5bc68e9f191e44e9a0f762f373977de9df1fbb3",
+                "sha256:25b64c7da4cd7479594d035c08c2d809eb4aab3a26e5a990ea98cc450c320f1f"
+            ],
+            "version": "==2019.11.28"
+        },
+        "chardet": {
+            "hashes": [
+                "sha256:84ab92ed1c4d4f16916e05906b6b75a6c0fb5db821cc65e70cbd64a3e2a5eaae",
+                "sha256:fc323ffcaeaed0e0a02bf4d117757b98aed530d9ed4531e3e15460124c106691"
+            ],
+            "version": "==3.0.4"
+        },
+        "click": {
+            "hashes": [
+                "sha256:8a18b4ea89d8820c5d0c7da8a64b2c324b4dabb695804dbfea19b9be9d88c0cc",
+                "sha256:e345d143d80bf5ee7534056164e5e112ea5e22716bbb1ce727941f4c8b471b9a"
+            ],
+            "version": "==7.1.1"
+        },
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