A shiny app to visualise amplicon data
R
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minimal example data
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.gitignore
MiDAS_1.20_subset.RData
MiDAS_1.21.RData
README.md
enterotypes.RData
rcolors.pdf
server.R
ui.R

README.md

Amplicon-visualiser

A shiny app to visualise amplicon data based on the ampvis2 package (https://github.com/MadsAlbertsen/ampvis2)

Live at https://kasperskytte.shinyapps.io/shinyampvis/

Run in RStudio (as administrator) on your local computer for larger data sets:

install.packages("shiny")
install.packages("devtools")
install.packages("Cairo") (For prettier plots)
install.packages("tidyverse")

shiny::runGitHub("amplicon-visualiser","kasperskytte")

If you get the error "there is no package 'packagename'" use install.packages("packagename") to install the required package(s).

Currently internal project on Aalborg University.