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@shaomingfu shaomingfu released this Nov 19, 2018 · 1 commit to master since this release

  • binaries can directly run on systems with lower version of glibc (by not using c++11)
  • add parameters for maximum number of CIGAR size
  • fix known bugs
Assets 5
Jun 10, 2018
setup preview ratio

@shaomingfu shaomingfu released this Aug 10, 2017 · 105 commits to master since this release

  • Add feature to automatically infer library-type.
Assets 4

@shaomingfu shaomingfu released this Aug 2, 2017 · 125 commits to master since this release

  • fix bug when using htslib 1.5
  • add merging single-exon transcripts for unstranded case
Assets 4

@shaomingfu shaomingfu released this Aug 1, 2017 · 129 commits to master since this release

  • Update compiling options for htslib, so chat libbz2, liblzma, libcrypto, and libcurl are not necessary.
  • Update compiling options for Clp, so that libbz2 is not necessary.
Assets 4

@shaomingfu shaomingfu released this Jun 28, 2017 · 141 commits to master since this release

  • Add heuristics to filter false positive edges
  • Add arguments checking
  • Change default parameter of min-transcript-length
Assets 4

@shaomingfu shaomingfu released this Mar 28, 2017 · 222 commits to master since this release

  • fix the issue for unstranded sample
  • for strand-specific sample, only use consistent reads
Assets 4
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