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Tools for building and manipulating graphs in Python
A collection of scripts and tools for loading, processing, and handling single cell data.
PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.
PHATE dimensionality reduction method implemented in R
Synthesis using Geometrically Aligned Random-walks
MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.
Package of Matlab scripts to preprocess CyTOF data