• GOTTCHA2 KBase app

    Python MIT Updated Jan 20, 2019
  • EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

    Perl 44 26 Updated Jan 14, 2019
  • JavaScript Updated Jan 8, 2019
  • Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to construct a phylogenetic tree. Provides evolutionary analyses (genes under positive selection) using CDS SNPs.

    HyPhy 7 8 Updated Nov 20, 2018
  • Quality Control of Next Generation Sequencing Data

    C++ 11 8 Updated Aug 17, 2018
  • Diagnostic targeted sequencing adjudication

    Perl 1 Updated Jun 4, 2018
  • Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:

    Perl 13 9 Updated May 7, 2018
  • Moore genome citation tracker

    R 1 Updated Nov 22, 2017
  • MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)

    Perl 7 4 Updated Dec 7, 2016
  • ADEPT is the only tool to date that dynamically assesses errors within reads by comparing position-specific and neighboring base quality scores with the distribution for the dataset being analyzed.

    Perl 5 3 Updated Jan 5, 2016