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LKremer/README.md

Hi there

I'm Lukas, a PhD student in the labs of Ana Martin-Villalba and Simon Anders in Heidelberg, Germany. I share Python and R code related to bioinformatics, data science, omics and the occasional fun code project.

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  1. 📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

    R 323 19

  2. Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis

    Python 34 31

  3. Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.

    Python 7

  4. showTree Public

    showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.

    Python 10 2

  5. CAFE_fig Public

    A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

    Python 27 10

  6. TEcov Public

    A pipeline to to determine the repeat content of genes and their neighboring regions.

    Python 6

159 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2021

2 contributions in private repositories Sep 10 – Sep 13

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