Pinned

1. ggpointdensity

   📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

   R 274 18

2. ursgal/ursgal

   Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis

   Python 30 27

3. showTree

   showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.

   Python 6 2

4. MSA_trimmer

   Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.

   Python 5

5. CAFE_fig

   A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

   Python 18 8

6. TEcov

   A pipeline to to determine the repeat content of genes and their neighboring regions.

   Python 5