{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":346070762,"defaultBranch":"main","name":"amplicon-seq","ownerLogin":"LSHTMPathogenSeqLab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-03-09T16:27:27.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/74730103?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1704386163.0","currentOid":""},"activityList":{"items":[{"before":"3f807aee9fe7004778a9cb603d2d9dc2daec6d51","after":"20abb7dc16068a178e1fec1c1967b7d914e2d177","ref":"refs/heads/main","pushedAt":"2024-02-14T15:34:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jodyphelan","name":"Jody Phelan","path":"/jodyphelan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8697224?s=80&v=4"},"commit":{"message":"update mp amplicons","shortMessageHtmlLink":"update mp amplicons"}},{"before":"174e2af1ebe7db2aa1d16988ed228a47e60c8f96","after":"3f807aee9fe7004778a9cb603d2d9dc2daec6d51","ref":"refs/heads/main","pushedAt":"2024-02-14T15:30:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jodyphelan","name":"Jody Phelan","path":"/jodyphelan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8697224?s=80&v=4"},"commit":{"message":"update mp amplicons","shortMessageHtmlLink":"update mp amplicons"}},{"before":"01731dc2e44ce0362aa1e801a342def6cccc89a9","after":"174e2af1ebe7db2aa1d16988ed228a47e60c8f96","ref":"refs/heads/main","pushedAt":"2024-01-07T18:44:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"emmacollins01","name":null,"path":"/emmacollins01","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73901521?s=80&v=4"},"commit":{"message":"Update amplicon_script.py","shortMessageHtmlLink":"Update amplicon_script.py"}},{"before":"7d8c794c17236dbd09631c58f1d343f6aa73f852","after":"01731dc2e44ce0362aa1e801a342def6cccc89a9","ref":"refs/heads/main","pushedAt":"2024-01-07T18:38:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"emmacollins01","name":null,"path":"/emmacollins01","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73901521?s=80&v=4"},"commit":{"message":"Update amplicon_script.py","shortMessageHtmlLink":"Update amplicon_script.py"}},{"before":"5d7d1a681c0aa1d7216b7cb36d2f514894befeea","after":"7d8c794c17236dbd09631c58f1d343f6aa73f852","ref":"refs/heads/main","pushedAt":"2024-01-07T18:36:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"emmacollins01","name":null,"path":"/emmacollins01","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73901521?s=80&v=4"},"commit":{"message":"Update amplicon_script.py\n\ncorrection","shortMessageHtmlLink":"Update amplicon_script.py"}},{"before":"340ca07040de5e1a59a0d9364a2524f38218b8bc","after":null,"ref":"refs/heads/emmacollins01-patch-1","pushedAt":"2024-01-04T16:36:03.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"emmacollins01","name":null,"path":"/emmacollins01","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73901521?s=80&v=4"}},{"before":"71cf39595da1b50303920e61341f81f5e33a1815","after":"5d7d1a681c0aa1d7216b7cb36d2f514894befeea","ref":"refs/heads/main","pushedAt":"2024-01-04T16:35:50.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"emmacollins01","name":null,"path":"/emmacollins01","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73901521?s=80&v=4"},"commit":{"message":"Merge pull request #1 from LSHTMPathogenSeqLab/emmacollins01-patch-1\n\nAdd samclip option to arguments","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2065975424\" data-permission-text=\"Title is private\" data-url=\"https://github.com/LSHTMPathogenSeqLab/amplicon-seq/issues/1\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/LSHTMPathogenSeqLab/amplicon-seq/pull/1/hovercard\" href=\"https://github.com/LSHTMPathogenSeqLab/amplicon-seq/pull/1\">#1</a> from LSHTMPathogenSeqLab/emmacollins01-patch-1"}},{"before":null,"after":"340ca07040de5e1a59a0d9364a2524f38218b8bc","ref":"refs/heads/emmacollins01-patch-1","pushedAt":"2024-01-04T16:35:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"emmacollins01","name":null,"path":"/emmacollins01","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/73901521?s=80&v=4"},"commit":{"message":"Add samclip option to arguments","shortMessageHtmlLink":"Add samclip option to arguments"}},{"before":"4209186a496f717178f358bdc7a740f07bdb4b94","after":"71cf39595da1b50303920e61341f81f5e33a1815","ref":"refs/heads/main","pushedAt":"2023-11-14T17:13:53.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jodyphelan","name":"Jody Phelan","path":"/jodyphelan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8697224?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"09f3f315d8b9926f2d288c988b721088704994fe","after":"4209186a496f717178f358bdc7a740f07bdb4b94","ref":"refs/heads/main","pushedAt":"2023-10-06T15:19:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jodyphelan","name":"Jody Phelan","path":"/jodyphelan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/8697224?s=80&v=4"},"commit":{"message":"updates","shortMessageHtmlLink":"updates"}},{"before":"575d24de55161740e419a804143a04eae3b59b58","after":"09f3f315d8b9926f2d288c988b721088704994fe","ref":"refs/heads/main","pushedAt":"2023-09-28T10:02:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update human_nanopore_amplicon_script.py","shortMessageHtmlLink":"Update human_nanopore_amplicon_script.py"}},{"before":"8f60ddd171ea95c480da01ee896d7f2308e29806","after":"575d24de55161740e419a804143a04eae3b59b58","ref":"refs/heads/main","pushedAt":"2023-09-07T13:41:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"389093dbfeb711f7031842ec56eb39da6f63cab3","after":"8f60ddd171ea95c480da01ee896d7f2308e29806","ref":"refs/heads/main","pushedAt":"2023-09-06T13:22:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Delete scripts/TEST_nanopore_human_amplicon_script.py","shortMessageHtmlLink":"Delete scripts/TEST_nanopore_human_amplicon_script.py"}},{"before":"49371643aa71b45d1fba954d69081541653759b2","after":"389093dbfeb711f7031842ec56eb39da6f63cab3","ref":"refs/heads/main","pushedAt":"2023-09-06T13:02:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Rename download_input_files.t to download_input_files.txt","shortMessageHtmlLink":"Rename download_input_files.t to download_input_files.txt"}},{"before":"2283d43ed7adcf86e1e77bf03d9ff73296d6bb5d","after":"49371643aa71b45d1fba954d69081541653759b2","ref":"refs/heads/main","pushedAt":"2023-09-06T13:02:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update and rename input_files.txt to download_input_files.t","shortMessageHtmlLink":"Update and rename input_files.txt to download_input_files.t"}},{"before":"169528b37607baf47944906f382663805295cd81","after":"2283d43ed7adcf86e1e77bf03d9ff73296d6bb5d","ref":"refs/heads/main","pushedAt":"2023-09-06T12:57:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Add files via upload","shortMessageHtmlLink":"Add files via upload"}},{"before":"b0946553ae1dbd75ba58762888908c352a01f25d","after":"169528b37607baf47944906f382663805295cd81","ref":"refs/heads/main","pushedAt":"2023-09-06T12:56:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Create input_files.txt","shortMessageHtmlLink":"Create input_files.txt"}},{"before":"53ef2dd5f79b207c1570ff7278a83ebf35c19fd7","after":"b0946553ae1dbd75ba58762888908c352a01f25d","ref":"refs/heads/main","pushedAt":"2023-09-06T11:56:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update human_nanopore_amplicon_script.py","shortMessageHtmlLink":"Update human_nanopore_amplicon_script.py"}},{"before":"a6da95e019159a673b637ec6fbbd7a138524de03","after":"53ef2dd5f79b207c1570ff7278a83ebf35c19fd7","ref":"refs/heads/main","pushedAt":"2023-09-06T09:01:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Create human_nanopore_amplicon_script.py","shortMessageHtmlLink":"Create human_nanopore_amplicon_script.py"}},{"before":"88956fd4b18739e031e1ed58eaa70482c6780308","after":"a6da95e019159a673b637ec6fbbd7a138524de03","ref":"refs/heads/main","pushedAt":"2023-09-06T09:00:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fad8188344a3fbcb338b8ad1a0c2ecc46be62b66","after":"88956fd4b18739e031e1ed58eaa70482c6780308","ref":"refs/heads/main","pushedAt":"2023-09-01T13:36:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_nanopore_human_amplicon_script.py","shortMessageHtmlLink":"Update TEST_nanopore_human_amplicon_script.py"}},{"before":"42b105f504a10c53bb35285a180094ff62c23aca","after":"fad8188344a3fbcb338b8ad1a0c2ecc46be62b66","ref":"refs/heads/main","pushedAt":"2023-09-01T11:32:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_nanopore_human_amplicon_script.py","shortMessageHtmlLink":"Update TEST_nanopore_human_amplicon_script.py"}},{"before":"1b5cbcf69e7b0aa2c6ffbb11a4e0994113732b96","after":"42b105f504a10c53bb35285a180094ff62c23aca","ref":"refs/heads/main","pushedAt":"2023-09-01T11:29:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_nanopore_human_amplicon_script.py","shortMessageHtmlLink":"Update TEST_nanopore_human_amplicon_script.py"}},{"before":"170ddd93b1c457fde8f8b691adc777f327fd5f7a","after":"1b5cbcf69e7b0aa2c6ffbb11a4e0994113732b96","ref":"refs/heads/main","pushedAt":"2023-08-31T14:37:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_emma_nanopore_amplicon_script.py","shortMessageHtmlLink":"Update TEST_emma_nanopore_amplicon_script.py"}},{"before":"b5795630edb3545f3bb9d9ee57b56d310efd9cd5","after":"170ddd93b1c457fde8f8b691adc777f327fd5f7a","ref":"refs/heads/main","pushedAt":"2023-08-31T14:32:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_emma_nanopore_amplicon_script.py","shortMessageHtmlLink":"Update TEST_emma_nanopore_amplicon_script.py"}},{"before":"515c5645f4e2f543c64fd0c2c91c5aedf6f6255c","after":"b5795630edb3545f3bb9d9ee57b56d310efd9cd5","ref":"refs/heads/main","pushedAt":"2023-08-31T12:53:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_nanopore_human_amplicon_script.py","shortMessageHtmlLink":"Update TEST_nanopore_human_amplicon_script.py"}},{"before":"31bcf1b55081d38b38400616cc5c4bd9baae2d61","after":"515c5645f4e2f543c64fd0c2c91c5aedf6f6255c","ref":"refs/heads/main","pushedAt":"2023-08-31T12:30:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_nanopore_human_amplicon_script.py","shortMessageHtmlLink":"Update TEST_nanopore_human_amplicon_script.py"}},{"before":"3c6b9f8ca5c9f86903a03bfe7ee712da34eca192","after":"31bcf1b55081d38b38400616cc5c4bd9baae2d61","ref":"refs/heads/main","pushedAt":"2023-08-31T12:24:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"56e85269893ec5c68ca16b2b4aebbea62d8b0aba","after":"3c6b9f8ca5c9f86903a03bfe7ee712da34eca192","ref":"refs/heads/main","pushedAt":"2023-08-25T14:53:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_emma_nanopore_amplicon_script.py","shortMessageHtmlLink":"Update TEST_emma_nanopore_amplicon_script.py"}},{"before":"84c10e6e173d5ca7d099de43b1fee25af3356a1a","after":"56e85269893ec5c68ca16b2b4aebbea62d8b0aba","ref":"refs/heads/main","pushedAt":"2023-08-25T14:43:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aosborne13","name":"Ashley Osborne","path":"/aosborne13","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/57442176?s=80&v=4"},"commit":{"message":"Update TEST_emma_nanopore_amplicon_script.py","shortMessageHtmlLink":"Update TEST_emma_nanopore_amplicon_script.py"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAD-rHcJwA","startCursor":null,"endCursor":null}},"title":"Activity · LSHTMPathogenSeqLab/amplicon-seq"}