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Breaking hearts and minds
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Breaking hearts and minds

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  • Arctic Code Vault Contributor

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@cambiotraining @iSEE

Popular repositories

  1. Clone of the Bioconductor repository for the SingleR package.

    R 63 13

  2. Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.

    TeX 29 5

  3. Clone of the Bioconductor repository for the basilisk package.

    R 16 6

  4. An archived version of the beachmat repository, see https://github.com/LTLA/beachmat for the active version.

    C++ 8

  5. Clone of the Bioconductor repository for the batchelor package.

    R 8 6

  6. Clone of the Bioconductor repository for the scRNAseq package.

    R 8 8

3,668 contributions in the last year

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Contribution activity

January 2021

Created 5 repositories

Created a pull request in LTLA/bluster that received 2 comments

Added a linkClusters utility to link across multiple clusters.

Given multiple clusterings, create a graph between clusters in different clusterings. @lazappi you may have some more thoughts on edge weighting st…

+259 −0 2 comments
Opened 7 other pull requests in 6 repositories
Reviewed 1 pull request in 1 repository
Alanocallaghan/scater 1 pull request

Created an issue in Bioconductor/GenomicRanges that received 15 comments

Making seqinfo<- easier to use with new levels

This works: library(GenomicRanges) len <- c(chrB=10, chrA=20) x <- GRanges("chrA:1-10", seqinfo=Seqinfo(seqnames=names(len), seqlengths=len)) This …

15 comments
Opened 18 other issues in 15 repositories
Bioconductor/GenomeInfoDb
1 open 1 closed
Bioconductor/Contributions
2 closed
SofieVG/FlowSOM
2 closed
rcastelo/GSVA
1 open
SydneyBioX/CiteFuse
1 open
Bioconductor/GenomicRanges
1 open
PeteHaitch/DelayedMatrixStats
1 closed
LTLA/BiocSingular
1 open
Bioconductor/DelayedArray
1 closed
Bioconductor/ExperimentHubData
1 open
RGLab/cytolib
1 open
klarman-cell-observatory/pegasusio
1 open
theislab/zellkonverter
1 closed
aertslab/AUCell
1 open
Alanocallaghan/scater
1 closed

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