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#
# Copyright (c) 2018 LabKey Corporation
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
from __future__ import unicode_literals
from labkey.utils import create_server_context
from labkey.experiment import Batch, Run, load_batch, save_batch
labkey_server = 'localhost:8080'
project_name = 'ModulesAssayTest' # Project folder name
context_path = 'labkey'
server_context = create_server_context(labkey_server, project_name, context_path, use_ssl=False)
assay_id = 3315 # provide one from your server
###################
# Save an Assay batch
###################
# Generate the Run object(s)
runTest = Run()
runTest.name = 'python upload'
runTest.data_rows = [{
# ColumnName: Value
'SampleId': 'Monkey 1',
'TimePoint': '2008/11/02 11:22:33',
'DoubleData': 4.5,
'HiddenData': 'another data point'
}, {
'SampleId': 'Monkey 2',
'TimePoint': '2008/11/02 14:00:01',
'DoubleData': 3.1,
'HiddenData': 'fozzy bear'
}, {
'SampleId': 'Monkey 3',
'TimePoint': '2008/11/02 14:00:01',
'DoubleData': 1.5,
'HiddenData': 'jimbo'
}]
runTest.properties['RunFieldName'] = 'Run Field Value'
# Generate the Batch object(s)
batch = Batch()
batch.runs = [runTest]
batch.name = 'python batch'
batch.properties['PropertyName'] = 'Property Value'
# Execute save api
saved_batch = save_batch(server_context, assay_id, batch)
###################
# Load an Assay batch
###################
batch_id = saved_batch.row_id # provide one from your server
run_group = load_batch(server_context, assay_id, batch_id)
if run_group is not None:
print("Batch Id: " + str(run_group.id))
print("Created By: " + run_group.created_by)
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