Resolving the Great Plate Count Anomaly
Microorganisms that engage in dormancy become members of a seed bank, a reservoir of genetic diversity, of which resuscitation from will be a critical solution to resolving the GPCA. This experiment represents a step in understanding how cell-cell signaling pathways can be used to study microbial seed bank and begin to resolve the GPCA.
analyses R code of workflow pipeline for .shared file output from using mothur R code for treatment x OTU species diversity analysis
bin Mothurtoolkit from Reservior Gradient Github repo as created by M. Muscraella
data mothur output .shared, .tax, .summary files
figures
R Programing v3.3.0 Mothur v1.36.1 gcc
Venus Kuo: Ph.D. student in the Lennon Lab
Dimensions of Biodiversity National Science Foundation