Data and code associated with this repository are associated with the following paper: Evolution of a minimal cell by Moger-Reischer RZ, Glass JI, Wise KS, Sun L, Bittencourt DMC, Lehmkuhl BK, Schoolmaster Jr DR, Lynch M, Lennon JT
On 20 May 2023, a Zenodo entry (doi 10.5281/zenodo.7953578) was created for this repository: https://doi.org/10.5281/zenodo.7953578
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Most of the data used for statistical analyses are contained in the
datafilesfolder. The exception to this are the data associated with growth curves, which can be found inscripts/5.GrowthCurves/data -
Within the
script/5.GrowthCurvefolder, there are four foldes./testcontains .Rmd files that run the Gompertz model using data in thedatafolder. In thebinfolder, there are a number of files needed for running the Gompertz model. Parameters and other output can be found in the/outputfolder. -
All of the code for runnings statistics and making figures can be found in
scripts -
Figures generated from data in this respository can be found in the
figuresfolder, organied by section of the paper in which they appear