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theoertical and experimental assessment of the importance of radiolytic methane oxidation in caves

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radiolyticCH4

====== This GitHub Repo contains data and R code included in the Lennon et al. manuscript "Microbial contributions to subterranean methane sinks".

#Authors

Jay T. Lennon and Kevin D. Webster

#Software Versions

RStudio: Version 0.98.1091

#Contents

Code Folder

radiolytic.theory.calcs = calculations used to address theory of radiolytic CH4 oxidation

uranium.bags.Rmd = Code used to read in data and perform analyses from the laboratory bag experiments to test for radiolytic CH4 oxidation.

cave.mesocosms.Rmd = Code used to read in data and perform analyses from the field mesocom experiment in Vietnam.

cave.rock.surface.Rmd = Code used to estimate surface area of rocks in the mesocosm experiments in Vietnam.

cave.qPCR.mob.raw.Rmd = Code used to analyze qPCR data associated with the mesocosm experiments in Vietnam.

cave.qPCR.mob.raw = Code used to estimate relative abundance of methane oxidizing bacteria from the mesocosm experiments in Vietnam.

cave.qPCR.summary.Rmd = Code used to summarize qPCR data from the mesocosm experiments in Vietnam.

Data Folder

Contains all of the data needed to run code in the Code Folder

Figures

Contains all of the figures generated from data and code

Contact Info

Jay T. Lennon lennonj@indiana.edu

Read LICENSE for copyright and licensing information

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