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Welcome to the TSSr wiki! We will introduce some preparatory steps for your data before importing it into TSSr!

1. How to find or build a BSgenome package for your species

2. Mapping

• 2.1 Mapping reads to genome with STAR (Recommend)
• 2.2 Mapping reads to genome with hisat2 (Try STAR first please 😄 )

3. real-world examples to run TSSr (TBA)

4. Benchmark

• Pombe

5. FAQ

If you have questions, please refer to FAQ first to check if your question already be answered or not. If not, please pose your question in Issues.