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Commits on Nov 9, 2012
  1. @jaredbischof

    Merge pull request #152 from jaredbischof/master

    jaredbischof authored
    Commit for hotfix
  2. @jaredbischof
  3. @jaredbischof

    Merge pull request #150 from jaredbischof/develop

    jaredbischof authored
    Modified code to check for lock files for demultiplex and merge mate-pai...
  4. @jaredbischof
Commits on Nov 8, 2012
  1. @jaredbischof

    Modified code to check for lock files for demultiplex and merge mate-…

    jaredbischof authored
    …pairs output files before running them, and to create them while running those operations. This prevents other operations (e.g. sequence stats) from being run on output files that are in the process of being written.
Commits on Nov 2, 2012
  1. @jaredbischof

    Merge pull request #143 from MG-RAST/develop

    jaredbischof authored
    more release 3.2.5
  2. @teharrison
  3. @jaredbischof
  4. @jaredbischof
  5. @jaredbischof
  6. @teharrison

    Merge pull request #140 from MG-RAST/develop

    teharrison authored
    release 3.2.5
  7. fixed spelling in info

    Travis Harrison authored
  8. correct name in db load command

    Travis Harrison authored
  9. @teharrison

    Merge pull request #139 from jaredbischof/develop

    teharrison authored
    Added check for .lock files before putting fastq files in merge mate-pai...
  10. @jaredbischof
  11. @wilke

    Merge pull request #137 from teharrison/develop

    wilke authored
    mix of stuff
  12. @teharrison
  13. @jaredbischof

    Fixed bugs and added check to make sure files in mate-pair merging ha…

    jaredbischof authored
    …ve the same number of sequences.
  14. @jaredbischof

    Added functionality to call merge mate-pairs with or without retainin…

    jaredbischof authored
    …g non-overlapping pairs and with or without an index (aka barcodes) file.
Commits on Nov 1, 2012
  1. updated info / functiona calls

    Travis Harrison authored
  2. fix perl warnings that spam html log

    Travis Harrison authored
  3. @jaredbischof

    Created global sequence length cutoff variable so that it can be edit…

    jaredbischof authored
    …ed in one place. Fixed library name that is looked for in metadata when sequences in a sub-directory are submitted. Changed .get call to .ajax post because uri was too long. Added options to submit index file with merge mate-pairs and option to retain or remove non-overlapping mate-pairs. Other bug fixes.
  4. more functions transformed to new schema

    Travis Harrison authored
  5. changed comment character to proper sql character

    Travis Harrison authored
  6. finished functionality of matrix resource

    Travis Harrison authored
  7. @jaredbischof

    Added options to input index file when merging mate-pairs and to remo…

    jaredbischof authored
    …ve or retain non-overlapping mate-pairs. Also, renamed button.
  8. @jaredbischof

    Added code to accept index file for merging mate-pairs. Also acceptin…

    jaredbischof authored
    …g option for removing or retaining non-overlapping mate-pairs.
Commits on Oct 31, 2012
  1. @jaredbischof

    Merge pull request #136 from paczian/master

    jaredbischof authored
    oAuth updated
  2. @paczian

    fixed issue with last patch

    paczian authored
  3. @paczian
Commits on Oct 30, 2012
  1. metadata template update

    Travis Harrison authored
  2. @teharrison

    Merge pull request #135 from paczian/master

    teharrison authored
    oAuth Server
Commits on Oct 29, 2012
  1. @jaredbischof

    Added link to Metazen.

    jaredbischof authored
  2. @jaredbischof
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