diff --git a/concepts/diagnosis/README.md b/concepts/diagnosis/README.md new file mode 100644 index 0000000..71cf589 --- /dev/null +++ b/concepts/diagnosis/README.md @@ -0,0 +1,5 @@ +The Clinical Classification Software (CCS) categorizes ICD-9 coded diagnoses into clinically meaningful groups. The categorization was developed by the Agency for Healthcare Research and Quality (AHRQ). More detail can be found on the AHRQ website: https://www.hcup-us.ahrq.gov/tools_software.jsp + +This folder contains: + +* `ccs_diagnosis_table.sql` - Creates two tables: `ccs_single_level_dx` and `ccs_multi_level_dx`. These two tables are loaded from `ccs_single_level_dx.csv.gz` and `ccs_multi_level_dx.csv.gz`. Note that the script assumes you are using PostgreSQL v9.4 or later, and you must execute the script from this directory. diff --git a/concepts/diagnosis/ccs_diagnosis_table.sql b/concepts/diagnosis/ccs_diagnosis_table.sql new file mode 100644 index 0000000..28d1343 --- /dev/null +++ b/concepts/diagnosis/ccs_diagnosis_table.sql @@ -0,0 +1,22 @@ +DROP TABLE IF EXISTS ccs_single_level_dx; +CREATE TABLE ccs_single_level_dx +( + ccs_id INT NOT NULL, + ccs_name VARCHAR(150) NOT NULL, + icd9_code CHAR(5) NOT NULL +); + +\copy ccs_single_level_dx from program 'gzip -dc ccs_single_level.csv.gz' CSV HEADER; + +DROP TABLE IF EXISTS ccs_multi_level_dx; +CREATE TABLE ccs_multi_level_dx +( + ccs_mid VARCHAR(10) NOT NULL, + ccs_name VARCHAR(100) NOT NULL, + ccs_group1 VARCHAR(100), + ccs_group2 VARCHAR(100), + ccs_group3 VARCHAR(100), + icd9_code CHAR(5) NOT NULL +); + +\copy ccs_multi_level_dx from program 'gzip -dc ccs_multi_level.csv.gz' CSV HEADER; diff --git a/concepts/diagnosis/ccs_multi_level.csv.gz b/concepts/diagnosis/ccs_multi_level.csv.gz new file mode 100644 index 0000000..2f54013 Binary files /dev/null and b/concepts/diagnosis/ccs_multi_level.csv.gz differ diff --git a/concepts/diagnosis/ccs_single_level.csv.gz b/concepts/diagnosis/ccs_single_level.csv.gz new file mode 100644 index 0000000..f3c0e02 Binary files /dev/null and b/concepts/diagnosis/ccs_single_level.csv.gz differ