diff --git a/concepts/severityscores/README.md b/concepts/severityscores/README.md index 0da4c12..f74a7db 100644 --- a/concepts/severityscores/README.md +++ b/concepts/severityscores/README.md @@ -4,15 +4,15 @@ This folder generates materialized views for a variety of severity of illness sc The queries make use of materialized views which aggregate data from the first day of a patient's ICU stay. To run the code, it is necessary to: 1. Run the scripts which generate the constituent materialized views - * uofirstday - generated by urine-output-first-day.sql - * ventfirstday - generated by ventilated-first-day.sql - * vitalsfirstday - generated by vitals-first-day.sql - * gcsfirstday - generated by gcs-first-day.sql - * labsfirstday - generated by labs-first-day.sql - * bloodgasfirstday - generated by blood-gas-first-day.sql (needed for subsequent view) - * bloodgasfirstdayarterial - generated by blood-gas-first-day-arterial.sql - * echodata - generated by echo-data.sql - * ventdurations - generated by ventilation-durations.sql + * echodata - generated by /concepts/echo-data.sql + * ventdurations - generated by /concepts/ventilation-durations.sql - (needed for subsequent view) + * vitalsfirstday - generated by /concepts/firstday/vitals-first-day.sql + * uofirstday - generated by /concepts/firstday/urine-output-first-day.sql + * ventfirstday - generated by /concepts/firstday/ventilated-first-day.sql + * gcsfirstday - generated by /concepts/firstday/gcs-first-day.sql + * labsfirstday - generated by /concepts/firstday/labs-first-day.sql + * bloodgasfirstday - generated by /concepts/firstday/blood-gas-first-day.sql - (needed for subsequent view) + * bloodgasfirstdayarterial - generated by /concepts/firstday/blood-gas-first-day-arterial.sql 2. Run the script for the severity of illness score you are interested in * OASIS - oasis.sql * SAPS - saps.sql