diff --git a/wfdb/__init__.py b/wfdb/__init__.py index 755d6d57..d70161d1 100644 --- a/wfdb/__init__.py +++ b/wfdb/__init__.py @@ -1,8 +1,8 @@ -from .io.record import (Record, MultiRecord, rdheader, rdrecord, rdsamp, - wrsamp, dl_database, edf2mit, sampfreq, signame) -from .io.annotation import (Annotation, rdann, wrann, show_ann_labels, - show_ann_classes, ann2rr) -from .io.download import get_dbs, get_record_list, dl_files, set_db_index_url -from .plot.plot import plot_items, plot_wfdb, plot_all_records +from wfdb.io.record import (Record, MultiRecord, rdheader, rdrecord, rdsamp, + wrsamp, dl_database, edf2mit, sampfreq, signame) +from wfdb.io.annotation import (Annotation, rdann, wrann, show_ann_labels, + show_ann_classes, ann2rr) +from wfdb.io.download import get_dbs, get_record_list, dl_files, set_db_index_url +from wfdb.plot.plot import plot_items, plot_wfdb, plot_all_records -from .version import __version__ +from wfdb.version import __version__ diff --git a/wfdb/io/__init__.py b/wfdb/io/__init__.py index 159d3356..626164ee 100644 --- a/wfdb/io/__init__.py +++ b/wfdb/io/__init__.py @@ -1,7 +1,7 @@ -from .record import (Record, MultiRecord, rdheader, rdrecord, rdsamp, wrsamp, - dl_database, edf2mit, sampfreq, signame, SIGNAL_CLASSES) -from ._signal import est_res, wr_dat_file -from .annotation import (Annotation, rdann, wrann, show_ann_labels, - show_ann_classes, ann2rr) -from .download import get_dbs, get_record_list, dl_files, set_db_index_url -from .tff import rdtff +from wfdb.io.record import (Record, MultiRecord, rdheader, rdrecord, rdsamp, wrsamp, + dl_database, edf2mit, sampfreq, signame, SIGNAL_CLASSES) +from wfdb.io._signal import est_res, wr_dat_file +from wfdb.io.annotation import (Annotation, rdann, wrann, show_ann_labels, + show_ann_classes, ann2rr) +from wfdb.io.download import get_dbs, get_record_list, dl_files, set_db_index_url +from wfdb.io.tff import rdtff diff --git a/wfdb/io/_header.py b/wfdb/io/_header.py index 374d4589..6457191b 100644 --- a/wfdb/io/_header.py +++ b/wfdb/io/_header.py @@ -6,8 +6,8 @@ import numpy as np import pandas as pd -from . import download -from . import _signal +from wfdb.io import download +from wfdb.io import _signal """ diff --git a/wfdb/io/_signal.py b/wfdb/io/_signal.py index 1efcc718..cf8dfaa8 100644 --- a/wfdb/io/_signal.py +++ b/wfdb/io/_signal.py @@ -3,7 +3,7 @@ import numpy as np -from . import download +from wfdb.io import download import pdb diff --git a/wfdb/io/annotation.py b/wfdb/io/annotation.py index e4f170a6..a8c55507 100644 --- a/wfdb/io/annotation.py +++ b/wfdb/io/annotation.py @@ -6,9 +6,9 @@ import posixpath import pdb -from . import download -from . import _header -from . import record +from wfdb.io import download +from wfdb.io import _header +from wfdb.io import record class Annotation(object): diff --git a/wfdb/io/download.py b/wfdb/io/download.py index e7380800..1e5e308e 100644 --- a/wfdb/io/download.py +++ b/wfdb/io/download.py @@ -7,7 +7,7 @@ import pdb import json -from . import record +from wfdb.io import record # The Physionet index url diff --git a/wfdb/io/record.py b/wfdb/io/record.py index 35408673..72ad01b9 100644 --- a/wfdb/io/record.py +++ b/wfdb/io/record.py @@ -12,9 +12,9 @@ import functools import pdb -from . import _header -from . import _signal -from . import download +from wfdb.io import _header +from wfdb.io import _signal +from wfdb.io import download # -------------- WFDB Signal Calibration and Classification ---------- # diff --git a/wfdb/plot/__init__.py b/wfdb/plot/__init__.py index b016477e..5210346a 100644 --- a/wfdb/plot/__init__.py +++ b/wfdb/plot/__init__.py @@ -1,4 +1,4 @@ """ The plot subpackage contains tools for plotting signals and annotations. """ -from .plot import plot_items, plot_wfdb, plot_all_records +from wfdb.plot.plot import plot_items, plot_wfdb, plot_all_records diff --git a/wfdb/plot/plot.py b/wfdb/plot/plot.py index d5d7c217..be50bf3c 100644 --- a/wfdb/plot/plot.py +++ b/wfdb/plot/plot.py @@ -3,10 +3,10 @@ import os import pdb -from ..io.record import Record, rdrecord -from ..io._header import float_types -from ..io._signal import downround, upround -from ..io.annotation import Annotation +from wfdb.io.record import Record, rdrecord +from wfdb.io._header import float_types +from wfdb.io._signal import downround, upround +from wfdb.io.annotation import Annotation def plot_items(signal=None, ann_samp=None, ann_sym=None, fs=None, diff --git a/wfdb/processing/__init__.py b/wfdb/processing/__init__.py index c8cfcf03..2c893cba 100644 --- a/wfdb/processing/__init__.py +++ b/wfdb/processing/__init__.py @@ -1,6 +1,6 @@ -from .basic import (resample_ann, resample_sig, resample_singlechan, - resample_multichan, normalize_bound, get_filter_gain) -from .evaluate import Comparitor, compare_annotations, benchmark_mitdb -from .hr import compute_hr, calc_rr, calc_mean_hr -from .peaks import find_peaks, find_local_peaks, correct_peaks -from .qrs import XQRS, xqrs_detect, gqrs_detect +from wfdb.processing.basic import (resample_ann, resample_sig, resample_singlechan, + resample_multichan, normalize_bound, get_filter_gain) +from wfdb.processing.evaluate import Comparitor, compare_annotations, benchmark_mitdb +from wfdb.processing.hr import compute_hr, calc_rr, calc_mean_hr +from wfdb.processing.peaks import find_peaks, find_local_peaks, correct_peaks +from wfdb.processing.qrs import XQRS, xqrs_detect, gqrs_detect diff --git a/wfdb/processing/basic.py b/wfdb/processing/basic.py index 1a674e15..b5dc462a 100644 --- a/wfdb/processing/basic.py +++ b/wfdb/processing/basic.py @@ -2,7 +2,7 @@ from scipy import signal import pdb -from ..io.annotation import Annotation +from wfdb.io.annotation import Annotation def resample_ann(resampled_t, ann_sample): diff --git a/wfdb/processing/evaluate.py b/wfdb/processing/evaluate.py index aea61666..f085df78 100644 --- a/wfdb/processing/evaluate.py +++ b/wfdb/processing/evaluate.py @@ -4,9 +4,9 @@ import numpy as np import requests -from ..io.annotation import rdann -from ..io.download import get_record_list -from ..io.record import rdsamp +from wfdb.io.annotation import rdann +from wfdb.io.download import get_record_list +from wfdb.io.record import rdsamp class Comparitor(object): diff --git a/wfdb/processing/peaks.py b/wfdb/processing/peaks.py index 5d674742..ee7ec321 100644 --- a/wfdb/processing/peaks.py +++ b/wfdb/processing/peaks.py @@ -1,7 +1,7 @@ import copy import numpy as np -from .basic import smooth +from wfdb.processing.basic import smooth def find_peaks(sig): diff --git a/wfdb/processing/qrs.py b/wfdb/processing/qrs.py index 22a3c548..cd2d936d 100644 --- a/wfdb/processing/qrs.py +++ b/wfdb/processing/qrs.py @@ -5,9 +5,9 @@ from scipy import signal from sklearn.preprocessing import normalize -from .basic import get_filter_gain -from .peaks import find_local_peaks -from ..io.record import Record +from wfdb.processing.basic import get_filter_gain +from wfdb.processing.peaks import find_local_peaks +from wfdb.io.record import Record class XQRS(object):