NaszeGenomy

Code for analysis and visualisation of over 1000 unrelated Polish genomes

Selected reports

Selected variants: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/lifestyle/lifestyle.pdf

Alcohol metabolism: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/lifestyle/alko.md

Allele frequency: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/variants_af/variants_af.md

Structural variants: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/sv/sv.md

Denovo: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/denovo/denovo_consequence.md

Subpopulation structure: https://github.com/MNMdiagnostics/NaszeGenomy/tree/main/ClusterAnalysis#readme

QC: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/qc/qc.md

ROHs: https://github.com/MNMdiagnostics/NaszeGenomy/blob/main/roh/roh.md