Development version of the SoilR package
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README.md

README.md

SoilR: Models of Soil Organic Matter Decomposition

This is the development version of SoilR. It is a rapidly evolving version that may be less stable than the official stable version in CRAN.

Documentation

The latest build of the package documentation can be found here:

Installation

There are several options.

  1. To install the latest bleeding edge commit without cloning the repository, you can use the devtoolspackage. If it is not installed yet type:
install.packages("devtools")

After installing devtools, you only need to run

devtools::install_github('MPIBGC-TEE/SoilR-exp/pkg')
  1. Download package file (this might be slightly older) go to the builds directory and download the latest SoilR_*.tar.gz file and install it with
install.packages("/path/to/the/downloaded/SoilR\*.tar.gz",repos=NULL)
  1. Clone the rpository Source possibly change files and install the package either
  • directly with devtools
    devtools::install('path/to/SoilR-exp/pkg')
  • or after building it with
    R CMD build path/to/SoilR-exp/pkg

Source code and contributing

You can download the source code of SoilR by cloning this repository

git clone https://github.com/MPIBGC-TEE/SoilR-exp.git

If you want to contribute new functions or repair bugs, send us a pull request.

References

To learn more about SoilR check the references below, and consult the workflows

  • Sierra, C. A., Müller, M., & Trumbore, S. E. (2014). Modeling radiocarbon dynamics in soils: SoilR version 1.1. Geoscientific Model Development, 7(5), 1919–1931. doi:10.5194/gmd-7-1919-2014
  • Sierra, C. A., Müller, M., & Trumbore, S. E. (2012). Models of soil organic matter decomposition: the SoilR package, version 1.0. Geosci. Model Dev., 5(4), 1045–1060. doi:10.5194/gmd-5-1045-2012