From fabd55f46394f96a6d2f8b3236b5bf77491bab50 Mon Sep 17 00:00:00 2001
From: MartinSchobben <schobbenmartin@gmail.com>
Date: Sat, 14 Oct 2023 15:37:17 +0200
Subject: [PATCH] pkgload and specify app dir

---
 .github/workflows/shiny-deploy.yaml  |  4 +-
 .github/workflows/test-coverage.yaml | 55 ----------------------------
 2 files changed, 2 insertions(+), 57 deletions(-)
 delete mode 100644 .github/workflows/test-coverage.yaml

diff --git a/.github/workflows/shiny-deploy.yaml b/.github/workflows/shiny-deploy.yaml
index 9a69799..512b321 100644
--- a/.github/workflows/shiny-deploy.yaml
+++ b/.github/workflows/shiny-deploy.yaml
@@ -28,7 +28,7 @@ jobs:
       - uses: r-lib/actions/setup-renv@v2
 
       - name: Install rsconnect
-        run: install.packages("rsconnect")
+        run: install.packages(c("rsconnect", "pkgload"))
         shell: Rscript {0}
 
       - name: Authorize and deploy app
@@ -39,5 +39,5 @@ jobs:
           SERVER: shinyapps.io # server to deploy
         run: |
           rsconnect::setAccountInfo("${{ secrets.RSCONNECT_USER }}", "${{ secrets.RSCONNECT_TOKEN }}", "${{ secrets.RSCONNECT_SECRET }}")
-          rsconnect::deployApp(appName = "${{ env.APPNAME }}", account = "${{ env.ACCOUNT }}", server = "${{ env.SERVER }}")
+          rsconnect::deployApp("inst/appdir/app.R", appName = "${{ env.APPNAME }}", account = "${{ env.ACCOUNT }}", server = "${{ env.SERVER }}")
         shell: Rscript {0}
diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
deleted file mode 100644
index 300b867..0000000
--- a/.github/workflows/test-coverage.yaml
+++ /dev/null
@@ -1,55 +0,0 @@
-# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
-# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
-on:
-  push:
-    branches: [main, master]
-  pull_request:
-    branches: [main, master]
-
-name: test-coverage
-
-jobs:
-  test-coverage:
-    runs-on: ubuntu-latest
-    env:
-      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
-
-    steps:
-      - uses: actions/checkout@v3
-
-      - name: Install system dependencies
-        run: |
-          sudo apt-get update
-          sudo apt-get install -y libnetcdf-dev libudunits2-dev libgdal-dev libgeos-dev libproj-dev libfontconfig1-dev
-
-      - uses: r-lib/actions/setup-r@v2
-        with:
-          use-public-rspm: true
-
-      - uses: r-lib/actions/setup-r-dependencies@v2
-        with:
-          extra-packages: any::covr
-          needs: coverage
-
-      - name: Test coverage
-        run: |
-          covr::codecov(
-            quiet = FALSE,
-            clean = FALSE,
-            install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
-          )
-        shell: Rscript {0}
-
-      - name: Show testthat output
-        if: always()
-        run: |
-          ## --------------------------------------------------------------------
-          find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
-        shell: bash
-
-      - name: Upload test results
-        if: failure()
-        uses: actions/upload-artifact@v3
-        with:
-          name: coverage-test-failures
-          path: ${{ runner.temp }}/package