@wmaddisn wmaddisn released this Jun 28, 2018

Assets 6

This is release version 3.51 of Mesquite, build 898. For more information see http://www.mesquiteproject.org. It has a few bug fixes beyond v. 3.50.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for macOS 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 1.7, 1.8 or 9. In fact, you can use either Mesquite version for either operating system version (depending on the Java version you have installed), but we recommend them for the operating systems as labelled.

@wmaddisn wmaddisn released this May 4, 2018 · 26 commits to master since this release

Assets 6

This is release version 3.50 of Mesquite, build 888. For more information see http://www.mesquiteproject.org. It has a few bug fixes and workarounds and an offline manual.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 1.7, 1.8 or 9. In fact, you can use either Mesquite version for either operating system version (depending on the Java version you have installed), but we recommend them for the operating systems as labelled.

@wmaddisn wmaddisn released this Jan 27, 2018 · 84 commits to master since this release

Assets 6

This is release version 3.40 of Mesquite, build 877. For more information see http://mesquiteproject.wikispaces.com. It has a few bug fixeds and enhancements, and is now compatible with Java 9.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 1.7, 1.8 or 9. In fact, you can use either Mesquite version for either operating system version (depending on the Java version you have installed), but we recommend them for the operating systems as labelled.

@wmaddisn wmaddisn released this Sep 20, 2017 · 207 commits to master since this release

Assets 6

This is release version 3.31 of Mesquite, build 859. For more information see http://mesquiteproject.wikispaces.com. Build 859 fixes a bug in installing extra packages. Version 3.31 build 858 was a minor update to 3.30, with a few enhancements, but primarily to solve a bug in interaction with alignment programs under older versions of Java.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use either Mesquite version for either operating system version (depending on the Java version you have installed), but we recommend them for the operating systems as labelled.

Note for all users: Mesquite 3.31 and older versions will likely not work with Java 1.9.

@wmaddisn wmaddisn released this Sep 20, 2017 · 212 commits to master since this release

Assets 6

This is release version 3.31 of Mesquite, build 858. For more information see http://mesquiteproject.wikispaces.com. It is a minor update to 3.30, with a few enhancements, but primarily to solve a bug in interaction with alignment programs under older versions of Java.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use either Mesquite version for either operating system version (depending on the Java version you have installed), but we recommend them for the operating systems as labelled.

Note for all users: Mesquite 3.31 and older versions will likely not work with Java 1.9.

@wmaddisn wmaddisn released this Sep 12, 2017 · 241 commits to master since this release

Assets 6

This is release version 3.30 of Mesquite, build 854. For more information see http://mesquiteproject.wikispaces.com.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use either Mesquite version for either operating system version, but we recommend them for the operating systems as labelled.

Note for all users: Mesquite 3.30 and older versions will likely not work with Java 1.9.

@wmaddisn wmaddisn released this Jan 2, 2017 · 445 commits to master since this release

Assets 6

This is release version 3.20 of Mesquite, build 801. For more information see http://mesquiteproject.wikispaces.com.

Note for Mac OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10+ version uses Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use either Mesquite version for either operating system version, but we recommend them for the operating systems as labelled.

@wmaddisn wmaddisn released this Dec 3, 2016 · 642 commits to master since this release

Assets 7

This is release version 3.11 of Mesquite, build 766. It is an update to 3.10 specifically to solve a bug in writing codon positions. For more information see http://mesquiteproject.wikispaces.com.

Note for OS X users: There are three alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) or 10.11 (El Capitan), and one labelled as for macOS Sierra 10.12. The 10.9 version uses Java 6 (also known as Java 1.6), and the other two versions use Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use any of these Mesquite versions for any operating system version, but we recommend them for the operating systems as labelled. The macOS Sierra version is supplied because of a peculiar installation requirement for Sierra.

@wmaddisn wmaddisn released this Jun 28, 2016 · 644 commits to master since this release

Assets 6

This is release version 3.10 of Mesquite, build 765. For more information see http://mesquiteproject.wikispaces.com.

Note for OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10 version uses Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use either Mesquite version for either operating system version, but we recommend them for the operating systems as labelled.

@wmaddisn wmaddisn released this Aug 16, 2015 · 836 commits to master since this release

Assets 6

This is release version 3.04 of Mesquite, build 725. For more information see http://mesquiteproject.wikispaces.com.

Note for OS X users: There are two alternative downloads, one labelled as being for OS X 10.9 (Mavericks) and lower, one labelled as being for OS X 10.10 (Yosemite) and higher. The difference is that the 10.9 version uses Java 6 (also known as Java 1.6), and the 10.10 version uses Java 7 or 8 (also known as Java 1.7 or 1.8). In fact, you can use either Mesquite version for either operating system version, but we recommend them for the operating systems as labelled.