@HD VN:1.3 SO:coordinate @SQ SN:contig42 LN:16426 @PG ID:bwa PN:bwa VN:0.7.13-r1126 CL:bwa mem -p -M file.fastq.gz M_HWI-ST1408:122:C5CHWACXX:5:2314:16639:7801 0 contig42 971 60 6S68M * 0 0 TCCCATGAGAGGAGACAAGTCGTAACAAGGTAAGCATATTGGAAAGTGTGCTTGGACAAACCAAGATATAGCTT ]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] NM:i:1 MD:Z:32C35 AS:i:63 XS:i:0 XP:i:3 M_HWI-ST1408:122:C5CHWACXX:6:1216:1282:44535 0 contig42 972 60 7S67M * 0 0 TCCTATAAGAGGAGACAAGTCGTAACAAGGTAAGCATATTGGAAAGTGTGCTTGGACAAACCAAGATATAGCTT JJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ NM:i:1 MD:Z:31C35 AS:i:62 XS:i:0 XP:i:1 M_HWI-ST1408:122:C5CHWACXX:6:2305:17383:58199 0 contig42 974 60 9S65M * 0 0 TCCTATGAAAGGAGACAAGTCGTAACAAGGTAAGCATATTGGAAAGTGTGCTTGGACAAACCAAGATATAGCTT JJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ NM:i:1 MD:Z:29C35 AS:i:60 XS:i:0 XP:i:1 M_HWI-ST1408:122:C5CHWACXX:6:2301:17642:91142 0 contig42 975 60 10S64M * 0 0 TCCTATGAGGGGAGACAAGTCGTAACAAGGTAAGCATATTGGAAAGTGTGCTTGGACAAACCAAGATATAGCTT JJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ NM:i:1 MD:Z:28C35 AS:i:59 XS:i:0 XP:i:1